RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 DUXAA6NLW8 204 aa18.33■□□□□ 0.53
FOXC1-201ENST00000380874 H0Y8X5 98 aa18.33■□□□□ 0.53
FOXC1-201ENST00000380874 KLHL18O94889 574 aa18.33■□□□□ 0.53
FOXC1-201ENST00000380874 MRPL3P09001 348 aaKnown RBP18.33■□□□□ 0.53
FOXC1-201ENST00000380874 GCGRP47871 477 aa18.33■□□□□ 0.53
FOXC1-201ENST00000380874 WNT4P56705 351 aa18.33■□□□□ 0.53
FOXC1-201ENST00000380874 PCBP4P57723 403 aaKnown RBP18.33■□□□□ 0.53
FOXC1-201ENST00000380874 ZMAT1Q5H9K5 638 aa18.33■□□□□ 0.53
FOXC1-201ENST00000380874 PARGQ86W56 976 aa18.33■□□□□ 0.53
FOXC1-201ENST00000380874 DEPDC7Q96QD5 511 aa18.33■□□□□ 0.53
FOXC1-201ENST00000380874 FAM83CQ9BQN1 747 aa18.33■□□□□ 0.53
FOXC1-201ENST00000380874 PLA2G12AQ9BZM1 189 aa18.33■□□□□ 0.53
FOXC1-201ENST00000380874 RFXAPO00287 272 aa18.33■□□□□ 0.52
FOXC1-201ENST00000380874 SSX4O60224 188 aa18.33■□□□□ 0.52
FOXC1-201ENST00000380874 ZNF10P21506 573 aaPredicted RBP18.33■□□□□ 0.52
FOXC1-201ENST00000380874 ZFP69Q49AA0 526 aa18.33■□□□□ 0.52
FOXC1-201ENST00000380874 ZC3H14Q6PJT7 736 aaKnown RBP18.33■□□□□ 0.52
FOXC1-201ENST00000380874 GDPD3Q7L5L3 318 aa18.33■□□□□ 0.52
FOXC1-201ENST00000380874 LINC00471Q8N535 108 aa18.33■□□□□ 0.52
FOXC1-201ENST00000380874 SAMD8Q96LT4 415 aa18.33■□□□□ 0.52
FOXC1-201ENST00000380874 MKRN2Q9H000 416 aaKnown RBP18.33■□□□□ 0.52
FOXC1-201ENST00000380874 CENPXA8MT69 81 aa18.32■□□□□ 0.52
FOXC1-201ENST00000380874 MAN2B1O00754 1011 aa18.32■□□□□ 0.52
FOXC1-201ENST00000380874 IFI30P13284 250 aa18.32■□□□□ 0.52
FOXC1-201ENST00000380874 PVRP15151 417 aa18.32■□□□□ 0.52
FOXC1-201ENST00000380874 RPS25P62851 125 aaKnown RBP18.32■□□□□ 0.52
FOXC1-201ENST00000380874 KLBQ86Z14 1044 aa18.32■□□□□ 0.52
FOXC1-201ENST00000380874 C10orf53Q8N6V4 93 aa18.32■□□□□ 0.52
FOXC1-201ENST00000380874 OR2L8Q8NGY9 312 aa18.32■□□□□ 0.52
FOXC1-201ENST00000380874 C2orf92A0A1B0GVN3 265 aa18.32■□□□□ 0.52
FOXC1-201ENST00000380874 URADA6NGE7 173 aa18.32■□□□□ 0.52
FOXC1-201ENST00000380874 LDB3O75112 727 aa18.32■□□□□ 0.52
FOXC1-201ENST00000380874 QPRTQ15274 297 aa18.32■□□□□ 0.52
FOXC1-201ENST00000380874 FCRLBQ6BAA4 426 aa18.32■□□□□ 0.52
FOXC1-201ENST00000380874 NKAIN4Q8IVV8 208 aa18.32■□□□□ 0.52
FOXC1-201ENST00000380874 CADM2Q8N3J6 435 aa18.32■□□□□ 0.52
FOXC1-201ENST00000380874 OR51A7Q8NH64 312 aa18.32■□□□□ 0.52
FOXC1-201ENST00000380874 COX14Q96I36 57 aa18.32■□□□□ 0.52
FOXC1-201ENST00000380874 PINK1Q9BXM7 581 aa18.32■□□□□ 0.52
FOXC1-201ENST00000380874 GABRB1P18505 474 aa18.32■□□□□ 0.52
FOXC1-201ENST00000380874 SNRPGP62308 76 aaKnown RBP18.32■□□□□ 0.52
FOXC1-201ENST00000380874 ZNF155Q12901 538 aaPredicted RBP18.32■□□□□ 0.52
FOXC1-201ENST00000380874 SUZ12Q15022 739 aaKnown RBP18.32■□□□□ 0.52
FOXC1-201ENST00000380874 ENTPD8Q5MY95 495 aa18.32■□□□□ 0.52
FOXC1-201ENST00000380874 PHC2Q8IXK0 858 aa18.32■□□□□ 0.52
FOXC1-201ENST00000380874 SLC7A5P1Q8MH63 180 aa18.32■□□□□ 0.52
FOXC1-201ENST00000380874 LRRC25Q8N386 305 aaPredicted RBP18.32■□□□□ 0.52
FOXC1-201ENST00000380874 GFM1Q96RP9 751 aaKnown RBP18.32■□□□□ 0.52
FOXC1-201ENST00000380874 ZNF717Q9BY31 904 aaPredicted RBP18.32■□□□□ 0.52
FOXC1-201ENST00000380874 SEMA4GQ9NTN9 838 aa18.32■□□□□ 0.52
FOXC1-201ENST00000380874 ADAM29Q9UKF5 820 aa18.32■□□□□ 0.52
FOXC1-201ENST00000380874 COL4A6Q14031 1691 aa18.32■□□□□ 0.52
FOXC1-201ENST00000380874 A0A1W2PPV9 198 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 A0A1W2PQ09 198 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 OR6C74A6NCV1 312 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 POM121BA6NF01 834 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 KLF8O95600 359 aaPredicted RBP18.31■□□□□ 0.52
FOXC1-201ENST00000380874 PDX1P52945 283 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 ABATP80404 500 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 PCDH1Q08174 1060 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 ARL9Q6T311 187 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 PLET1Q6UQ28 207 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 CCL4L1Q8NHW4 92 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 SLC6A20Q9NP91 592 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 REV1Q9UBZ9 1251 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 SLC7A7Q9UM01 511 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 NOTCH4Q99466 2003 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 TANC1Q9C0D5 1861 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 HBQ1P09105 142 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 IDNKQ5T6J7 187 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 KIAA1211LQ6NV74 962 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 ZNF544Q6NX49 715 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 PLBD1Q6P4A8 553 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 RTL10Q7L3V2 364 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 RANBP3LQ86VV4 465 aaPredicted RBP18.31■□□□□ 0.52
FOXC1-201ENST00000380874 CPOQ8IVL8 374 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 KLHL36Q8N4N3 616 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 SLC41A3Q96GZ6 507 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 ACTRT3Q9BYD9 372 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 LHX9Q9NQ69 397 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 INIPQ9NRY2 104 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 TXNL4BQ9NX01 149 aaKnown RBP18.31■□□□□ 0.52
FOXC1-201ENST00000380874 TEKT2Q9UIF3 430 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 A0A1W2PRQ8 180 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 IRGMA1A4Y4 181 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 PRODHO43272 600 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 LGI1O95970 557 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 TYRP1P17643 537 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 GJD3Q8N144 294 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 DPH1Q9BZG8 443 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 C6orf106Q9H6K1 298 aaPredicted RBP18.31■□□□□ 0.52
FOXC1-201ENST00000380874 APOBEC3BQ9UH17 382 aaKnown RBP18.31■□□□□ 0.52
FOXC1-201ENST00000380874 LIPT1Q9Y234 373 aa18.31■□□□□ 0.52
FOXC1-201ENST00000380874 FAM240BA0A1B0GVZ2 78 aa18.3■□□□□ 0.52
FOXC1-201ENST00000380874 NCR1O76036 304 aa18.3■□□□□ 0.52
FOXC1-201ENST00000380874 PKLRP30613 574 aa18.3■□□□□ 0.52
FOXC1-201ENST00000380874 AHRP35869 848 aa18.3■□□□□ 0.52
FOXC1-201ENST00000380874 TALDO1P37837 337 aa18.3■□□□□ 0.52
FOXC1-201ENST00000380874 MLLT11Q13015 90 aaPredicted RBP18.3■□□□□ 0.52
FOXC1-201ENST00000380874 NANOGP1Q8N7R0 232 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms