RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 C1orf61Q13536 156 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 NCF4Q15080 339 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 DECR1Q16698 335 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 TYW3Q6IPR3 259 aaKnown RBP21.59■■□□□ 1.05
VPS16-201ENST00000380443 TUBA1AQ71U36 451 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 OR4N5Q8IXE1 308 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 C19orf47Q8N9M1 422 aaKnown RBP21.59■■□□□ 1.05
VPS16-201ENST00000380443 ADAMTS18Q8TE60 1221 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 AMBNQ9NP70 447 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 TBC1D23Q9NUY8 699 aa21.59■■□□□ 1.05
VPS16-201ENST00000380443 GUSBP08236 651 aa21.58■■□□□ 1.05
VPS16-201ENST00000380443 SLC35E2P0CK97 266 aa21.58■■□□□ 1.05
VPS16-201ENST00000380443 ACP2P11117 423 aa21.58■■□□□ 1.05
VPS16-201ENST00000380443 CDH3P22223 829 aa21.58■■□□□ 1.05
VPS16-201ENST00000380443 CD38P28907 300 aa21.58■■□□□ 1.05
VPS16-201ENST00000380443 UGT2B10P36537 528 aa21.58■■□□□ 1.05
VPS16-201ENST00000380443 RGS8P57771 180 aaPredicted RBP21.58■■□□□ 1.05
VPS16-201ENST00000380443 SIGLEC14Q08ET2 396 aa21.58■■□□□ 1.05
VPS16-201ENST00000380443 DUSP5Q16690 384 aa21.58■■□□□ 1.05
VPS16-201ENST00000380443 FAM26EQ8N5C1 309 aa21.58■■□□□ 1.05
VPS16-201ENST00000380443 SDF2Q99470 211 aa21.58■■□□□ 1.05
VPS16-201ENST00000380443 PRRG3Q9BZD7 231 aa21.58■■□□□ 1.05
VPS16-201ENST00000380443 ZNF350Q9GZX5 532 aa21.58■■□□□ 1.05
VPS16-201ENST00000380443 ANKRA2Q9H9E1 313 aa21.58■■□□□ 1.05
VPS16-201ENST00000380443 C11orf16Q9NQ32 467 aa21.58■■□□□ 1.05
VPS16-201ENST00000380443 B4DGG1 531 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 FGF17O60258 216 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 DNAJB6O75190 326 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 STX11O75558 287 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 UBXN7O94888 489 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 ZBTB11O95625 1053 aaPredicted RBP21.57■■□□□ 1.04
VPS16-201ENST00000380443 DBIP07108 87 aaKnown RBP21.57■■□□□ 1.04
VPS16-201ENST00000380443 NT5EP21589 574 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 GIPRP48546 466 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 SMSP52788 366 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 RAB15P59190 212 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 SHC2P98077 582 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 CDK5Q00535 292 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 FOXD4Q12950 439 aaPredicted RBP21.57■■□□□ 1.04
VPS16-201ENST00000380443 TSPAN31Q12999 210 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 PRICKLE4Q2TBC4 344 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 RRM2BQ7LG56 351 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 NLGN4XQ8N0W4 816 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 ZNF619Q8N2I2 560 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 LGALS12Q96DT0 336 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 TCTN2Q96GX1 697 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 QRSL1Q9H0R6 528 aaKnown RBP21.57■■□□□ 1.04
VPS16-201ENST00000380443 SCN3AQ9NY46 2000 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 A0A087WUU8 490 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 A0A1W2PR77 199 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 ZNF860A6NHJ4 632 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 AGAP5A6NIR3 686 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 M0R082 166 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 FCMRO60667 390 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 COQ9O75208 318 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 ADORA3P0DMS8 318 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 ST6GAL1P15907 406 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 RACK1P63244 317 aaKnown RBP21.57■■□□□ 1.04
VPS16-201ENST00000380443 KHDRBS1Q07666 443 aaKnown RBP eCLIP21.57■■□□□ 1.04
VPS16-201ENST00000380443 PRTGQ2VWP7 1150 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 MFSD4BQ5TF39 518 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 RASSF6Q6ZTQ3 369 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 SLC46A3Q7Z3Q1 461 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 MCATQ8IVS2 390 aaKnown RBP21.57■■□□□ 1.04
VPS16-201ENST00000380443 ARHGEF39Q8N4T4 335 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 PIGXQ8TBF5 258 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 ACOT11Q8WXI4 607 aaPredicted RBP21.57■■□□□ 1.04
VPS16-201ENST00000380443 ZG16BQ96DA0 208 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 NELL2Q99435 816 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 ARMC7Q9H6L4 198 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 KRCC1Q9NPI7 259 aaPredicted RBP21.57■■□□□ 1.04
VPS16-201ENST00000380443 FBXL21Q9UKT6 434 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 CLCA2Q9UQC9 943 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 CHST2Q9Y4C5 530 aa21.57■■□□□ 1.04
VPS16-201ENST00000380443 ZIC2O95409 532 aaPredicted RBP21.56■■□□□ 1.04
VPS16-201ENST00000380443 SOX14O95416 240 aa21.56■■□□□ 1.04
VPS16-201ENST00000380443 TYRP1P17643 537 aa21.56■■□□□ 1.04
VPS16-201ENST00000380443 TNNI3P19429 210 aa21.56■■□□□ 1.04
VPS16-201ENST00000380443 RPS4Y1P22090 263 aaKnown RBP21.56■■□□□ 1.04
VPS16-201ENST00000380443 SOX18P35713 384 aa21.56■■□□□ 1.04
VPS16-201ENST00000380443 TRMT12Q53H54 448 aaKnown RBP21.56■■□□□ 1.04
VPS16-201ENST00000380443 S100ZQ8WXG8 99 aa21.56■■□□□ 1.04
VPS16-201ENST00000380443 HOXB13Q92826 284 aaPredicted RBP21.56■■□□□ 1.04
VPS16-201ENST00000380443 CTHRC1Q96CG8 243 aa21.56■■□□□ 1.04
VPS16-201ENST00000380443 SHDQ96IW2 340 aa21.56■■□□□ 1.04
VPS16-201ENST00000380443 MAT2BQ9NZL9 334 aa21.56■■□□□ 1.04
VPS16-201ENST00000380443 WNT16Q9UBV4 365 aa21.56■■□□□ 1.04
VPS16-201ENST00000380443 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.56■■□□□ 1.04
VPS16-201ENST00000380443 IRGMA1A4Y4 181 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 SNTNA6NMZ2 147 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 EFCAB9A8MZ26 197 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 ENTPD6O75354 484 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 MAP3K8P41279 467 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 STAT5AP42229 794 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 PCYT1AP49585 367 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 C21orf59P57076 290 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 MGAT2Q10469 447 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 MAP4K2Q12851 820 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 GINS1Q14691 196 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 C11orf91Q3C1V1 193 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms