RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 LARS2Q15031 903 aaKnown RBP9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 LTB4RQ15722 352 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 OCLNQ16625 522 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 INAVAQ3KP66 663 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 ZNF628Q5EBL2 1059 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 ENTPD8Q5MY95 495 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 EXOSC6Q5RKV6 272 aaKnown RBP9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 SLC25A30Q5SVS4 291 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 ZC3H14Q6PJT7 736 aaKnown RBP9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 FAM111BQ6SJ93 734 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 Q6ZS52 159 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 IQCHQ86VS3 1027 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 PEX5LQ8IYB4 626 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 OR4N4Q8N0Y3 316 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 CA13Q8N1Q1 262 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 CSNK1A1LQ8N752 337 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 MORN4Q8NDC4 146 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 OR4K5Q8NGD3 323 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 OR52P1PQ8NH57 321 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 GNPDA2Q8TDQ7 276 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 ADAMTS18Q8TE60 1221 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 PATE1Q8WXA2 126 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 SLC35A4Q96G79 324 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 STACQ99469 402 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 CCDC3Q9BQI4 270 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 PRRG3Q9BZD7 231 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 PIGUQ9H490 435 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 MAN2C1Q9NTJ4 1040 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 TBC1D23Q9NUY8 699 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 NCDNQ9UBB6 729 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 ZNF232Q9UNY5 417 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 MRPS17Q9Y2R5 130 aaKnown RBP9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 HEMK1Q9Y5R4 338 aaPredicted RBP9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 KCNE3Q9Y6H6 103 aa9.8□□□□□ -0.84
POLR2J3-201ENST00000379340 ARHGEF17Q96PE2 2063 aaPredicted RBP9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 FAM208BQ5VWN6 2430 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 IGHV1OR15-9A0A0B4J2B8 117 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 FAM227AF5H4B4 570 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 H3BN98 237 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 TMX2-CTNND1H3BSU7 103 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 CYP7B1O75881 506 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 OR5F1O95221 314 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 LCKP06239 509 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 ALOX5P09917 674 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 CCNYL3P0C7X3 344 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 CD36P16671 472 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 UGT2B10P36537 528 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 TGFBR2P37173 567 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 SLC15A1P46059 708 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 TUBA1BP68363 451 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 ST3GAL4Q11206 333 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 COL9A2Q14055 689 aaPredicted RBP9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 ELOCQ15369 112 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 TIGD6Q17RP2 521 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 C6orf132Q5T0Z8 1188 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 FHL5Q5TD97 284 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 RNLSQ5VYX0 342 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 FRRS1Q6ZNA5 592 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 TUBA1AQ71U36 451 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 COMTD1Q86VU5 262 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 GKN2Q86XP6 184 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 CDRT4Q8N9R6 151 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 B3GNT7Q8NFL0 401 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 S100ZQ8WXG8 99 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 COL26A1Q96A83 441 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 OTUB1Q96FW1 271 aaPredicted RBP9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 VMP1Q96GC9 406 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 WFDC6Q9BQY6 131 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 ORAI3Q9BRQ5 295 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 POLDIP3Q9BY77 421 aaKnown RBP9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 SLC25A19Q9HC21 320 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 KRCC1Q9NPI7 259 aaPredicted RBP9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 POLE3Q9NRF9 147 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 DUSP22Q9NRW4 184 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 GPR83Q9NYM4 423 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 ZNF443Q9Y2A4 671 aaPredicted RBP9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 RPL36Q9Y3U8 105 aaKnown RBP9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 WDR45Q9Y484 360 aa9.79□□□□□ -0.84
POLR2J3-201ENST00000379340 NINQ8N4C6 2090 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 FASNP49327 2511 aaKnown RBP9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 IRGMA1A4Y4 181 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 LILRA5A6NI73 299 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 CYR61O00622 381 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 SRPX2O60687 465 aaPredicted RBP9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 COQ9O75208 318 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 TP53P04637 393 aaPredicted RBP9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 EIF2S1P05198 315 aaKnown RBP9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 GUSBP08236 651 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 STSP08842 583 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 ADORA3P0DMS8 318 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 ACP2P11117 423 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 PVRP15151 417 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 FUT4P22083 530 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 CDH3P22223 829 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 MMP11P24347 488 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 CD27P26842 260 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 C21orf33P30042 268 aaPredicted RBP9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 PTGER1P34995 402 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 FASLGP48023 281 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms