RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 PCBP4P57723 403 aaKnown RBP15.5■□□□□ 0.07
TRIM39-201ENST00000376656 GRK1Q15835 563 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 AADACL4Q5VUY2 407 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 CD276Q5ZPR3 534 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 C16orf62Q7Z3J2 963 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 LINC00471Q8N535 108 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 C12orf4Q9NQ89 552 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 LSM7Q9UK45 103 aaKnown RBP15.5■□□□□ 0.07
TRIM39-201ENST00000376656 LIPT1Q9Y234 373 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 ABLIM3O94929 683 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 TCRBP04435 133 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 GNSP15586 552 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 NAGAP17050 411 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 PITPNBP48739 271 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 OR10A3P58181 314 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 FAM27D1Q5T7N8 215 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 HBMQ6B0K9 141 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 ZNF322Q6U7Q0 402 aaPredicted RBP15.5■□□□□ 0.07
TRIM39-201ENST00000376656 LYPD4Q6UWN0 246 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 BEST4Q8NFU0 473 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 GLYATL1Q969I3 302 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 BTBD1Q9H0C5 482 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 QRSL1Q9H0R6 528 aaKnown RBP15.5■□□□□ 0.07
TRIM39-201ENST00000376656 DPAGT1Q9H3H5 408 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 ERVMER34-1Q9H9K5 563 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 MTCL1Q9Y4B5 1905 aaKnown RBP15.5■□□□□ 0.07
TRIM39-201ENST00000376656 FRS3O43559 492 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 SLC2A10O95528 541 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 ATF4P18848 351 aaPredicted RBP15.5■□□□□ 0.07
TRIM39-201ENST00000376656 SHC1P29353 583 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 THBS2P35442 1172 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 ATP6V1E1P36543 226 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 EPHA5P54756 1037 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 POLR2LP62875 67 aaKnown RBP15.5■□□□□ 0.07
TRIM39-201ENST00000376656 ACSM1Q08AH1 577 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 CAMK2DQ13557 499 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 SLC36A2Q495M3 483 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 KLHL12Q53G59 568 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 CLLU1Q5K131 121 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 OAFQ86UD1 273 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 C7orf57Q8NEG2 295 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 OR9A1PQ8NGU1 263 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 LMLNQ96KR4 655 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 RBP7Q96R05 134 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 DDX31Q9H8H2 851 aaKnown RBP15.5■□□□□ 0.07
TRIM39-201ENST00000376656 CUEDC1Q9NWM3 386 aaPredicted RBP15.5■□□□□ 0.07
TRIM39-201ENST00000376656 IL20RAQ9UHF4 553 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 RASD1Q9Y272 281 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 BACE2Q9Y5Z0 518 aa15.5■□□□□ 0.07
TRIM39-201ENST00000376656 RNF13O43567 381 aa15.49■□□□□ 0.07
TRIM39-201ENST00000376656 RGS9O75916 674 aaPredicted RBP15.49■□□□□ 0.07
TRIM39-201ENST00000376656 CTRB1P17538 263 aa15.49■□□□□ 0.07
TRIM39-201ENST00000376656 RFX3P48380 749 aa15.49■□□□□ 0.07
TRIM39-201ENST00000376656 SRP54P61011 504 aaKnown RBP15.49■□□□□ 0.07
TRIM39-201ENST00000376656 POM121L1PQ3SYA9 428 aa15.49■□□□□ 0.07
TRIM39-201ENST00000376656 CTRB2Q6GPI1 263 aa15.49■□□□□ 0.07
TRIM39-201ENST00000376656 ASTLQ6HA08 431 aaPredicted RBP15.49■□□□□ 0.07
TRIM39-201ENST00000376656 SMARCD3Q6STE5 483 aa15.49■□□□□ 0.07
TRIM39-201ENST00000376656 GNPDA2Q8TDQ7 276 aa15.49■□□□□ 0.07
TRIM39-201ENST00000376656 NACC2Q96BF6 587 aa15.49■□□□□ 0.07
TRIM39-201ENST00000376656 SLC35G5Q96KT7 338 aa15.49■□□□□ 0.07
TRIM39-201ENST00000376656 NRTNQ99748 197 aa15.49■□□□□ 0.07
TRIM39-201ENST00000376656 YIPF4Q9BSR8 244 aa15.49■□□□□ 0.07
TRIM39-201ENST00000376656 B3GNT4Q9C0J1 378 aa15.49■□□□□ 0.07
TRIM39-201ENST00000376656 ELAC1Q9H777 363 aaKnown RBP15.49■□□□□ 0.07
TRIM39-201ENST00000376656 PLAGL1Q9UM63 463 aa15.49■□□□□ 0.07
TRIM39-201ENST00000376656 CKMP06732 381 aa15.49■□□□□ 0.07
TRIM39-201ENST00000376656 GIFP27352 417 aa15.49■□□□□ 0.07
TRIM39-201ENST00000376656 MTNR1BP49286 362 aa15.49■□□□□ 0.07
TRIM39-201ENST00000376656 DBPQ10586 325 aaPredicted RBP15.49■□□□□ 0.07
TRIM39-201ENST00000376656 PLEKHM3Q6ZWE6 761 aa15.49■□□□□ 0.07
TRIM39-201ENST00000376656 GET4Q7L5D6 327 aaPredicted RBP15.49■□□□□ 0.07
TRIM39-201ENST00000376656 SIRT6Q8N6T7 355 aa15.49■□□□□ 0.07
TRIM39-201ENST00000376656 OR52N1Q8NH53 320 aa15.49■□□□□ 0.07
TRIM39-201ENST00000376656 KLK6Q92876 244 aa15.49■□□□□ 0.07
TRIM39-201ENST00000376656 OR2M2Q96R28 347 aa15.49■□□□□ 0.07
TRIM39-201ENST00000376656 CLEC4MQ9H2X3 399 aaPredicted RBP15.49■□□□□ 0.07
TRIM39-201ENST00000376656 UBQLN2Q9UHD9 624 aa15.49■□□□□ 0.07
TRIM39-201ENST00000376656 PRRC2BQ5JSZ5 2229 aaKnown RBP15.49■□□□□ 0.07
TRIM39-201ENST00000376656 SOCS6O14544 535 aa15.48■□□□□ 0.07
TRIM39-201ENST00000376656 IFNA7P01567 189 aa15.48■□□□□ 0.07
TRIM39-201ENST00000376656 IGHA1P01876 353 aa15.48■□□□□ 0.07
TRIM39-201ENST00000376656 CHRM4P08173 479 aa15.48■□□□□ 0.07
TRIM39-201ENST00000376656 RBMS1P29558 406 aaKnown RBP15.48■□□□□ 0.07
TRIM39-201ENST00000376656 KCTD20Q7Z5Y7 419 aa15.48■□□□□ 0.07
TRIM39-201ENST00000376656 GPALPP1Q8IXQ4 340 aa15.48■□□□□ 0.07
TRIM39-201ENST00000376656 RFKQ969G6 155 aa15.48■□□□□ 0.07
TRIM39-201ENST00000376656 SCML1Q9UN30 329 aa15.48■□□□□ 0.07
TRIM39-201ENST00000376656 EXOGQ9Y2C4 368 aaKnown RBP15.48■□□□□ 0.07
TRIM39-201ENST00000376656 NUBP2Q9Y5Y2 271 aa15.48■□□□□ 0.07
TRIM39-201ENST00000376656 CSNK1G3Q9Y6M4 447 aa15.48■□□□□ 0.07
TRIM39-201ENST00000376656 NUP210Q8TEM1 1887 aaPredicted RBP15.48■□□□□ 0.07
TRIM39-201ENST00000376656 TET1Q8NFU7 2136 aa15.48■□□□□ 0.07
TRIM39-201ENST00000376656 SURF4O15260 269 aa15.48■□□□□ 0.07
TRIM39-201ENST00000376656 OLFM2O95897 454 aa15.48■□□□□ 0.07
TRIM39-201ENST00000376656 CD3GP09693 182 aa15.48■□□□□ 0.07
TRIM39-201ENST00000376656 DNASE1P24855 282 aa15.48■□□□□ 0.07
TRIM39-201ENST00000376656 ACSL1P33121 698 aa15.48■□□□□ 0.07
TRIM39-201ENST00000376656 BSGP35613 385 aa15.48■□□□□ 0.07
TRIM39-201ENST00000376656 CCR6P51684 374 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms