RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 YIPF2Q9BWQ6 316 aa16.46■□□□□ 0.23
CTTN-203ENST00000376561 NECTIN3Q9NQS3 549 aa16.46■□□□□ 0.23
CTTN-203ENST00000376561 LANCL2Q9NS86 450 aa16.46■□□□□ 0.23
CTTN-203ENST00000376561 GMEB2Q9UKD1 530 aa16.46■□□□□ 0.23
CTTN-203ENST00000376561 SLC13A4Q9UKG4 626 aa16.46■□□□□ 0.23
CTTN-203ENST00000376561 TMCC3Q9ULS5 477 aa16.46■□□□□ 0.23
CTTN-203ENST00000376561 GPR55Q9Y2T6 319 aaPredicted RBP16.46■□□□□ 0.23
CTTN-203ENST00000376561 IFT52Q9Y366 437 aa16.46■□□□□ 0.23
CTTN-203ENST00000376561 VPS13AQ96RL7 3174 aa16.46■□□□□ 0.23
CTTN-203ENST00000376561 A0A087WXM4 84 aa16.46■□□□□ 0.23
CTTN-203ENST00000376561 HRKO00198 91 aa16.46■□□□□ 0.23
CTTN-203ENST00000376561 STX11O75558 287 aa16.46■□□□□ 0.23
CTTN-203ENST00000376561 UGT2B17O75795 530 aa16.46■□□□□ 0.23
CTTN-203ENST00000376561 NKX2-2O95096 273 aa16.46■□□□□ 0.23
CTTN-203ENST00000376561 CBLP22681 906 aa16.46■□□□□ 0.23
CTTN-203ENST00000376561 SSTR4P31391 388 aa16.46■□□□□ 0.23
CTTN-203ENST00000376561 GABRA3P34903 492 aa16.46■□□□□ 0.23
CTTN-203ENST00000376561 EMDP50402 254 aa16.46■□□□□ 0.23
CTTN-203ENST00000376561 SMIM11AP58511 58 aa16.46■□□□□ 0.23
CTTN-203ENST00000376561 CCL7P80098 99 aa16.46■□□□□ 0.23
CTTN-203ENST00000376561 GPR68Q15743 365 aa16.46■□□□□ 0.23
CTTN-203ENST00000376561 DCST1Q5T197 706 aa16.46■□□□□ 0.23
CTTN-203ENST00000376561 TSPYL5Q86VY4 417 aaPredicted RBP16.46■□□□□ 0.23
CTTN-203ENST00000376561 AQP11Q8NBQ7 271 aa16.46■□□□□ 0.23
CTTN-203ENST00000376561 HDAC2Q92769 488 aaKnown RBP16.46■□□□□ 0.23
CTTN-203ENST00000376561 PRRC1Q96M27 445 aa16.46■□□□□ 0.23
CTTN-203ENST00000376561 SAP130Q9H0E3 1048 aa16.46■□□□□ 0.23
CTTN-203ENST00000376561 ZNF556Q9HAH1 456 aa16.46■□□□□ 0.23
CTTN-203ENST00000376561 TUBA8Q9NY65 449 aaPredicted RBP16.46■□□□□ 0.23
CTTN-203ENST00000376561 SLC6A14Q9UN76 642 aa16.46■□□□□ 0.23
CTTN-203ENST00000376561 CDC14AQ9UNH5 594 aa16.46■□□□□ 0.23
CTTN-203ENST00000376561 ZNF443Q9Y2A4 671 aaPredicted RBP16.46■□□□□ 0.23
CTTN-203ENST00000376561 AK1P00568 194 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 RPLP0P05388 317 aaKnown RBP16.45■□□□□ 0.22
CTTN-203ENST00000376561 RPP38P78345 283 aaKnown RBP16.45■□□□□ 0.22
CTTN-203ENST00000376561 PSG6Q00889 435 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 IL5RAQ01344 420 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 SERTAD2Q14140 314 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 ZNF267Q14586 743 aaPredicted RBP16.45■□□□□ 0.22
CTTN-203ENST00000376561 SEC23BQ15437 767 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 NADK2Q4G0N4 442 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 RBM48Q5RL73 367 aaKnown RBP16.45■□□□□ 0.22
CTTN-203ENST00000376561 C6orf141Q5SZD1 244 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 SLC23A3Q6PIS1 610 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 MED25Q71SY5 747 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 ZNF619Q8N2I2 560 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 CLIP4Q8N3C7 705 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 FBLIM1Q8WUP2 373 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 NAT6Q93015 286 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 OR1F2PQ96R84 312 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 PITX2Q99697 317 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 LMF2Q9BU23 707 aaKnown RBP16.45■□□□□ 0.22
CTTN-203ENST00000376561 CACYBPQ9HB71 228 aaKnown RBP16.45■□□□□ 0.22
CTTN-203ENST00000376561 FANCEQ9HB96 536 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 FOLH1BQ9HBA9 442 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 FBXO34Q9NWN3 711 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 ZNF232Q9UNY5 417 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 HSPE1-MOB4S4R3N1 261 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 SEC16AO15027 2179 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 A0A1W2PRQ8 180 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 AGAP5A6NIR3 686 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 TRIM64CA6NLI5 447 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 ARHGAP33O14559 1287 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 FRS3O43559 492 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 CER1O95813 267 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 GASTP01350 101 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 POU2F1P14859 743 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 POU6F2P78424 691 aaPredicted RBP16.45■□□□□ 0.22
CTTN-203ENST00000376561 DSG2Q14126 1118 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 DGCR6Q14129 220 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 LAIR2Q6ISS4 152 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 SLC7A13Q8TCU3 470 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 GTPBP3Q969Y2 492 aaKnown RBP16.45■□□□□ 0.22
CTTN-203ENST00000376561 HRASLS5Q96KN8 279 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 APOL4Q9BPW4 351 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 FUZQ9BT04 418 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 CNPPD1Q9BV87 410 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 FNDC11Q9BVV2 318 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 ADNPQ9H2P0 1102 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 KLHL28Q9NXS3 571 aa16.45■□□□□ 0.22
CTTN-203ENST00000376561 HEMK1Q9Y5R4 338 aaPredicted RBP16.45■□□□□ 0.22
CTTN-203ENST00000376561 DMDP11532 3685 aa16.44■□□□□ 0.22
CTTN-203ENST00000376561 CENPVL1A0A0U1RR11 272 aa16.44■□□□□ 0.22
CTTN-203ENST00000376561 GXYLT2A0PJZ3 443 aa16.44■□□□□ 0.22
CTTN-203ENST00000376561 FAAHO00519 579 aa16.44■□□□□ 0.22
CTTN-203ENST00000376561 DSCR3O14972 297 aa16.44■□□□□ 0.22
CTTN-203ENST00000376561 SOX30O94993 753 aa16.44■□□□□ 0.22
CTTN-203ENST00000376561 OXSR1O95747 527 aaPredicted RBP16.44■□□□□ 0.22
CTTN-203ENST00000376561 IFNA16P05015 189 aa16.44■□□□□ 0.22
CTTN-203ENST00000376561 ANKRD34CP0C6C1 535 aa16.44■□□□□ 0.22
CTTN-203ENST00000376561 CRHBPP24387 322 aa16.44■□□□□ 0.22
CTTN-203ENST00000376561 HLCSP50747 726 aa16.44■□□□□ 0.22
CTTN-203ENST00000376561 BIKQ13323 160 aa16.44■□□□□ 0.22
CTTN-203ENST00000376561 LARS2Q15031 903 aaKnown RBP16.44■□□□□ 0.22
CTTN-203ENST00000376561 YOD1Q5VVQ6 348 aaPredicted RBP16.44■□□□□ 0.22
CTTN-203ENST00000376561 FIGNL1Q6PIW4 674 aa16.44■□□□□ 0.22
CTTN-203ENST00000376561 ARHGAP22Q7Z5H3 698 aa16.44■□□□□ 0.22
CTTN-203ENST00000376561 OR4D9Q8NGE8 314 aa16.44■□□□□ 0.22
CTTN-203ENST00000376561 ZNF578Q96N58 590 aaPredicted RBP16.44■□□□□ 0.22
CTTN-203ENST00000376561 PTCHD1Q96NR3 888 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms