RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 MAGEB17A8MXT2 336 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 L7N2F9 121 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 SELENOFO60613 162 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 TCRBP04435 133 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 PKMP14618 531 aaKnown RBP11.45□□□□□ -0.58
C9orf3-203ENST00000375315 DDX6P26196 483 aaKnown RBP eCLIP11.45□□□□□ -0.58
C9orf3-203ENST00000375315 AQP1P29972 269 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 ZNF140P52738 457 aaPredicted RBP11.45□□□□□ -0.58
C9orf3-203ENST00000375315 RPS25P62851 125 aaKnown RBP11.45□□□□□ -0.58
C9orf3-203ENST00000375315 QSOX2Q6ZRP7 698 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 TEX47Q8TBZ9 253 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 KCNJ9Q92806 393 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 ESRP2Q9H6T0 727 aaKnown RBP11.45□□□□□ -0.58
C9orf3-203ENST00000375315 ELOVL2Q9NXB9 296 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 CTSFQ9UBX1 484 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 WDR87Q6ZQQ6 2873 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 CHD5Q8TDI0 1954 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 MYO10Q9HD67 2058 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 TCRBV16S1A1N1A0A5B0 115 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 FAM74A7A6NL05 159 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 ADH1CP00326 375 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 TRBC1P01850 177 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 GLAP06280 429 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 NR2F6P10588 404 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 GSTM5P46439 218 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 MAZP56270 477 aaKnown RBP11.45□□□□□ -0.58
C9orf3-203ENST00000375315 AP1S1P61966 158 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 RAB30Q15771 203 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 FAM74A3Q4VXF1 159 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 IFI44LQ53G44 452 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 PTRHD1Q6GMV3 140 aaKnown RBP11.45□□□□□ -0.58
C9orf3-203ENST00000375315 SLC27A4Q6P1M0 643 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 PAQR6Q6TCH4 344 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 VITQ6UXI7 678 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 Q6ZVL8 140 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 TMPRSS9Q7Z410 1059 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 SYNPOQ8N3V7 929 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 NSMAFQ92636 917 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 TADA1Q96BN2 335 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 MRPL38Q96DV4 380 aaKnown RBP11.45□□□□□ -0.58
C9orf3-203ENST00000375315 TSSK6Q9BXA6 273 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 C11orf16Q9NQ32 467 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 ENAMQ9NRM1 1142 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 NLE1Q9NVX2 485 aaPredicted RBP11.45□□□□□ -0.58
C9orf3-203ENST00000375315 USP34Q70CQ2 3546 aa11.45□□□□□ -0.58
C9orf3-203ENST00000375315 FGF19O95750 216 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 ECDO95905 644 aaPredicted RBP11.44□□□□□ -0.58
C9orf3-203ENST00000375315 EPHX1P07099 455 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 FABP1P07148 127 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 SYPP08247 313 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 DEFA5Q01523 94 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 ARHGEF7Q14155 803 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 GRIN2CQ14957 1233 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 AFTPHQ6ULP2 937 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 CRTC1Q6UUV9 634 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 SERPINA9Q86WD7 417 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 MCATQ8IVS2 390 aaKnown RBP11.44□□□□□ -0.58
C9orf3-203ENST00000375315 EIF4E3Q8N5X7 224 aaKnown RBP11.44□□□□□ -0.58
C9orf3-203ENST00000375315 AQP11Q8NBQ7 271 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 GPR26Q8NDV2 337 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 SCARB1Q8WTV0 552 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 ADAMTS14Q8WXS8 1223 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 SLC38A3Q99624 504 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 IL26Q9NPH9 171 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 YARS2Q9Y2Z4 477 aaKnown RBP11.44□□□□□ -0.58
C9orf3-203ENST00000375315 MANBAO00462 879 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 RGS11O94810 467 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 KDM4BO94953 1096 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 GUCA1CO95843 209 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 CTSLP07711 333 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 JUPP14923 745 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 CAPZA2P47755 286 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 SELENOWP63302 87 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 DSG2Q14126 1118 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 SWI5Q1ZZU3 235 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 TMEM201Q5SNT2 666 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 ZNF783Q6ZMS7 281 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 RAB11FIP2Q7L804 512 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 TSEN54Q7Z6J9 526 aaKnown RBP11.44□□□□□ -0.58
C9orf3-203ENST00000375315 TDHQ8IZJ6 230 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 KLK6Q92876 244 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 LRRC46Q96FV0 321 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 C10orf90Q96M02 699 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 IL17CQ9P0M4 197 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 TINAGQ9UJW2 476 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 PPT2Q9UMR5 302 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 DLGAP4Q9Y2H0 992 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 SCAMP1O15126 338 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 LRATO95237 230 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 POP4O95707 220 aaKnown RBP11.44□□□□□ -0.58
C9orf3-203ENST00000375315 FGF9P31371 208 aaPredicted RBP11.44□□□□□ -0.58
C9orf3-203ENST00000375315 KIAA1024LP59773 190 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 RAET1GQ6H3X3 334 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 CASP12Q6UXS9 341 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 GDPD4Q6W3E5 623 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 ZNF454Q8N9F8 522 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 GANCQ8TET4 914 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 ELMOD3Q96FG2 381 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 FCRL1Q96LA6 429 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 IER2Q9BTL4 223 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms