RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 SEMA3CQ99985 751 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 CCM2Q9BSQ5 444 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 SLC39A9Q9NUM3 307 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 GPR83Q9NYM4 423 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 MARCH2Q9P0N8 246 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 ETV7Q9Y603 341 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 CPNE6O95741 557 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 THP07101 528 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 DAOP14920 347 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 ZNF124Q15973 351 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 UBE2NLQ5JXB2 153 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 HBMQ6B0K9 141 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 FBXL6Q8N531 539 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 DPP7Q9UHL4 492 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 PPP1R3CQ9UQK1 317 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 IL5P05113 134 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 PIM1P11309 404 aaPredicted RBP6.3□□□□□ -1.4
UBR4-204ENST00000375254 MLLT10P55197 1068 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 GPR17Q13304 367 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.3□□□□□ -1.4
UBR4-204ENST00000375254 ZNF551Q7Z340 670 aaPredicted RBP6.3□□□□□ -1.4
UBR4-204ENST00000375254 ADGRG5Q8IZF4 528 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 ANAPC16Q96DE5 110 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 DOK1Q99704 481 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 V9GY05 133 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 SMARCA4P51532 1647 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 RFPL4AA6NLU0 287 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 RFPL4AL1F8VTS6 287 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 TGFB1I1O43294 461 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 ALDOCP09972 364 aaKnown RBP6.3□□□□□ -1.4
UBR4-204ENST00000375254 DRD5P21918 477 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 IVDP26440 423 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 NDUFV1P49821 464 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 GP2P55259 537 aaKnown RBP6.3□□□□□ -1.4
UBR4-204ENST00000375254 MAP2K5Q13163 448 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 GBX1Q14549 363 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 PSMG4Q5JS54 123 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 TMPRSS7Q7RTY8 843 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 B3GNT8Q7Z7M8 397 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 PDZD3Q86UT5 571 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 GLYATL1Q969I3 302 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 RBM18Q96H35 190 aaKnown RBP6.3□□□□□ -1.4
UBR4-204ENST00000375254 SNRNP25Q9BV90 132 aaKnown RBP6.3□□□□□ -1.4
UBR4-204ENST00000375254 ARV1Q9H2C2 271 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 PIH1D1Q9NWS0 290 aaKnown RBP6.3□□□□□ -1.4
UBR4-204ENST00000375254 OSGIN1Q9UJX0 560 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 SYPP08247 313 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 ANXA7P20073 488 aaKnown RBP6.3□□□□□ -1.4
UBR4-204ENST00000375254 ALAS2P22557 587 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 ITPKBP27987 946 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 DCTP40126 519 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 SNRPGP62308 76 aaKnown RBP6.3□□□□□ -1.4
UBR4-204ENST00000375254 DOC2AQ14183 400 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 ACSM3Q53FZ2 586 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 TAC4Q86UU9 113 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 TSTD1Q8NFU3 115 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 FGGYQ96C11 551 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 ATG101Q9BSB4 218 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 PARD6AQ9NPB6 346 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 OR5H14A6NHG9 310 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 TXNP10599 105 aaKnown RBP6.3□□□□□ -1.4
UBR4-204ENST00000375254 NDUFV2P19404 249 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 PGCP20142 388 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 CXADRP78310 365 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 SIM1P81133 766 aaPredicted RBP6.3□□□□□ -1.4
UBR4-204ENST00000375254 KLBQ86Z14 1044 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 LINC00518Q8N0U6 118 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 TMEM151AQ8N4L1 468 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 RBP7Q96R05 134 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 PLEKHA2Q9HB19 425 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 DNAJC27Q9NZQ0 273 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 B4DEV8 164 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 CSNK2A2P19784 350 aaPredicted RBP6.3□□□□□ -1.4
UBR4-204ENST00000375254 CBLP22681 906 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 WDR5P61964 334 aaKnown RBP6.3□□□□□ -1.4
UBR4-204ENST00000375254 SLC43A2Q8N370 569 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 OR4K17Q8NGC6 315 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 OR52E4Q8NGH9 312 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 ACP6Q9NPH0 428 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 NOCTQ9UK39 431 aaKnown RBP6.3□□□□□ -1.4
UBR4-204ENST00000375254 SLC17A3O00476 420 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 RACK1P63244 317 aaKnown RBP6.3□□□□□ -1.4
UBR4-204ENST00000375254 SLC22A18Q96BI1 424 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 SAT2Q96F10 170 aaPredicted RBP6.3□□□□□ -1.4
UBR4-204ENST00000375254 EXOSC3Q9NQT5 275 aaKnown RBP6.3□□□□□ -1.4
UBR4-204ENST00000375254 ENPP4Q9Y6X5 453 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 CCNOP22674 350 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 RAB28P51157 221 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 C6orf136Q5SQH8 315 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 TMEM135Q86UB9 458 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 MSI2Q96DH6 328 aaKnown RBP6.3□□□□□ -1.4
UBR4-204ENST00000375254 DMAC2Q9NW81 257 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 A0A1W2PPV4 95 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 SOX18P35713 384 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 ATP5IP56385 69 aaPredicted RBP6.29□□□□□ -1.4
UBR4-204ENST00000375254 SNRPEP62304 92 aaKnown RBP6.29□□□□□ -1.4
UBR4-204ENST00000375254 ZNF74Q16587 644 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 RHBDF2Q6PJF5 856 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 PLA2G15Q8NCC3 412 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 GPR148Q8TDV2 347 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms