RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 KANK2Q63ZY3 851 aa19.75■□□□□ 0.75
CCDC28B-201ENST00000373602 HOMEZQ8IX15 550 aa19.75■□□□□ 0.75
CCDC28B-201ENST00000373602 OR2T11Q8NH01 316 aa19.75■□□□□ 0.75
CCDC28B-201ENST00000373602 AENQ8WTP8 325 aaKnown RBP19.75■□□□□ 0.75
CCDC28B-201ENST00000373602 EFHD2Q96C19 240 aaPredicted RBP19.75■□□□□ 0.75
CCDC28B-201ENST00000373602 ELP4Q96EB1 424 aa19.75■□□□□ 0.75
CCDC28B-201ENST00000373602 ZNF764Q96H86 408 aaPredicted RBP19.75■□□□□ 0.75
CCDC28B-201ENST00000373602 FAM111AQ96PZ2 611 aa19.75■□□□□ 0.75
CCDC28B-201ENST00000373602 ROPN1BQ9BZX4 212 aaPredicted RBP19.75■□□□□ 0.75
CCDC28B-201ENST00000373602 TUBB1Q9H4B7 451 aa19.75■□□□□ 0.75
CCDC28B-201ENST00000373602 ROPN1Q9HAT0 212 aaPredicted RBP19.75■□□□□ 0.75
CCDC28B-201ENST00000373602 SLC24A3Q9HC58 644 aa19.75■□□□□ 0.75
CCDC28B-201ENST00000373602 FIS1Q9Y3D6 152 aa19.75■□□□□ 0.75
CCDC28B-201ENST00000373602 DNAJC15Q9Y5T4 150 aa19.75■□□□□ 0.75
CCDC28B-201ENST00000373602 NPHS1O60500 1241 aa19.74■□□□□ 0.75
CCDC28B-201ENST00000373602 CHEK2O96017 543 aa19.74■□□□□ 0.75
CCDC28B-201ENST00000373602 FGF4P08620 206 aa19.74■□□□□ 0.75
CCDC28B-201ENST00000373602 GAS1P54826 345 aa19.74■□□□□ 0.75
CCDC28B-201ENST00000373602 IFFO1Q0D2I5 559 aa19.74■□□□□ 0.75
CCDC28B-201ENST00000373602 CYP27C1Q4G0S4 372 aa19.74■□□□□ 0.75
CCDC28B-201ENST00000373602 RELL2Q8NC24 303 aaPredicted RBP19.74■□□□□ 0.75
CCDC28B-201ENST00000373602 OR14L1PQ8NHC6 308 aa19.74■□□□□ 0.75
CCDC28B-201ENST00000373602 ZPLD1Q8TCW7 415 aa19.74■□□□□ 0.75
CCDC28B-201ENST00000373602 CCT7Q99832 543 aa19.74■□□□□ 0.75
CCDC28B-201ENST00000373602 DDX18Q9NVP1 670 aaKnown RBP19.74■□□□□ 0.75
CCDC28B-201ENST00000373602 SLC17A7Q9P2U7 560 aa19.74■□□□□ 0.75
CCDC28B-201ENST00000373602 FBXL2Q9UKC9 423 aa19.74■□□□□ 0.75
CCDC28B-201ENST00000373602 DVL2O14641 736 aa19.73■□□□□ 0.75
CCDC28B-201ENST00000373602 TBX19O60806 448 aa19.73■□□□□ 0.75
CCDC28B-201ENST00000373602 IL2RAP01589 272 aa19.73■□□□□ 0.75
CCDC28B-201ENST00000373602 CHRNGP07510 517 aa19.73■□□□□ 0.75
CCDC28B-201ENST00000373602 CYP4B1P13584 511 aa19.73■□□□□ 0.75
CCDC28B-201ENST00000373602 CPN1P15169 458 aa19.73■□□□□ 0.75
CCDC28B-201ENST00000373602 SRD5A2P31213 254 aa19.73■□□□□ 0.75
CCDC28B-201ENST00000373602 EMBQ6PCB8 327 aa19.73■□□□□ 0.75
CCDC28B-201ENST00000373602 GFM2Q969S9 779 aaKnown RBP19.73■□□□□ 0.75
CCDC28B-201ENST00000373602 DTNBP1Q96EV8 351 aa19.73■□□□□ 0.75
CCDC28B-201ENST00000373602 TRIB1Q96RU8 372 aa19.73■□□□□ 0.75
CCDC28B-201ENST00000373602 ZNF559Q9BR84 538 aa19.73■□□□□ 0.75
CCDC28B-201ENST00000373602 CALHM2Q9HA72 323 aa19.73■□□□□ 0.75
CCDC28B-201ENST00000373602 TAS2R10Q9NYW0 307 aa19.73■□□□□ 0.75
CCDC28B-201ENST00000373602 ZNF629Q9UEG4 869 aaPredicted RBP19.73■□□□□ 0.75
CCDC28B-201ENST00000373602 MRPS18CQ9Y3D5 142 aaKnown RBP19.73■□□□□ 0.75
CCDC28B-201ENST00000373602 L3MBTL1Q9Y468 752 aa19.73■□□□□ 0.75
CCDC28B-201ENST00000373602 MBD3L4A6NDZ8 208 aaPredicted RBP19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 MBD3L3A6NE82 208 aaPredicted RBP19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 MBD3L5A6NJ08 208 aaPredicted RBP19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 SYT5O00445 386 aa19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 SPAG7O75391 227 aa19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 LINC00032P0C843 101 aa19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 SDC1P18827 310 aa19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 BMP5P22003 454 aa19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 GRK2P25098 689 aa19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 ZNF136P52737 540 aa19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 GFRA1P56159 465 aa19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 GAB1Q13480 694 aa19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 UGT3A2Q3SY77 523 aa19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 RFTN2Q52LD8 501 aaPredicted RBP19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 ARL13AQ5H913 290 aaPredicted RBP19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 SH2D4BQ5SQS7 431 aa19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 CES4AQ5XG92 561 aa19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 POMZP3Q6PJE2 187 aa19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 ENPP6Q6UWR7 440 aa19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 ZNF551Q7Z340 670 aaPredicted RBP19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 IFNEQ86WN2 208 aa19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 TRIM42Q8IWZ5 723 aa19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 MBD3L2Q8NHZ7 208 aaPredicted RBP19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 TCP10LQ8TDR4 215 aa19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 MED12Q93074 2177 aa19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 LMF2Q9BU23 707 aaKnown RBP19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 MECRQ9BV79 373 aa19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 REEP4Q9H6H4 257 aa19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 Q9N2J8 555 aa19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 CBLCQ9ULV8 474 aa19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 TMED5Q9Y3A6 229 aa19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 TRAF6Q9Y4K3 522 aa19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 DCHS2Q6V1P9 2916 aa19.72■□□□□ 0.75
CCDC28B-201ENST00000373602 TMEM233B4DJY2 109 aa19.71■□□□□ 0.75
CCDC28B-201ENST00000373602 B4DXG7 233 aa19.71■□□□□ 0.75
CCDC28B-201ENST00000373602 LSM1O15116 133 aaKnown RBP19.71■□□□□ 0.75
CCDC28B-201ENST00000373602 PDPK1O15530 556 aa19.71■□□□□ 0.75
CCDC28B-201ENST00000373602 EVI2BP34910 448 aa19.71■□□□□ 0.75
CCDC28B-201ENST00000373602 ASCL1P50553 236 aa19.71■□□□□ 0.75
CCDC28B-201ENST00000373602 RPL38P63173 70 aaKnown RBP19.71■□□□□ 0.75
CCDC28B-201ENST00000373602 RCAN2Q14206 197 aa19.71■□□□□ 0.75
CCDC28B-201ENST00000373602 ZNHIT3Q15649 155 aaPredicted RBP19.71■□□□□ 0.75
CCDC28B-201ENST00000373602 DECR1Q16698 335 aa19.71■□□□□ 0.75
CCDC28B-201ENST00000373602 ZNF385BQ569K4 471 aa19.71■□□□□ 0.75
CCDC28B-201ENST00000373602 OR5M10Q6IEU7 315 aa19.71■□□□□ 0.75
CCDC28B-201ENST00000373602 ANKRD26P1Q6NSI1 321 aa19.71■□□□□ 0.75
CCDC28B-201ENST00000373602 WDR93Q6P2C0 686 aa19.71■□□□□ 0.75
CCDC28B-201ENST00000373602 ARSKQ6UWY0 536 aa19.71■□□□□ 0.75
CCDC28B-201ENST00000373602 TWIST2Q8WVJ9 160 aa19.71■□□□□ 0.75
CCDC28B-201ENST00000373602 CAVIN3Q969G5 261 aa19.71■□□□□ 0.75
CCDC28B-201ENST00000373602 TSSK3Q96PN8 268 aa19.71■□□□□ 0.75
CCDC28B-201ENST00000373602 SH3GL2Q99962 352 aa19.71■□□□□ 0.75
CCDC28B-201ENST00000373602 EML4Q9HC35 981 aaKnown RBP19.71■□□□□ 0.75
CCDC28B-201ENST00000373602 KIAA1549Q9HCM3 1950 aa19.71■□□□□ 0.75
CCDC28B-201ENST00000373602 TTC36A6NLP5 189 aa19.7■□□□□ 0.74
CCDC28B-201ENST00000373602 AKAP10O43572 662 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms