RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 PLOD3O60568 738 aa12.51□□□□□ -0.41
CSTF2-201ENST00000372972 ADORA3P0DMS8 318 aa12.51□□□□□ -0.41
CSTF2-201ENST00000372972 ACP2P11117 423 aa12.51□□□□□ -0.41
CSTF2-201ENST00000372972 PIPP12273 146 aaPredicted RBP12.51□□□□□ -0.41
CSTF2-201ENST00000372972 ST6GAL1P15907 406 aa12.51□□□□□ -0.41
CSTF2-201ENST00000372972 MLLT10P55197 1068 aa12.51□□□□□ -0.41
CSTF2-201ENST00000372972 SHC2P98077 582 aa12.51□□□□□ -0.41
CSTF2-201ENST00000372972 ST3GAL3Q11203 375 aa12.51□□□□□ -0.41
CSTF2-201ENST00000372972 DGUOKQ16854 277 aa12.51□□□□□ -0.41
CSTF2-201ENST00000372972 PLAG1Q6DJT9 500 aa12.51□□□□□ -0.41
CSTF2-201ENST00000372972 TYW3Q6IPR3 259 aaKnown RBP12.51□□□□□ -0.41
CSTF2-201ENST00000372972 SLCO6A1Q86UG4 719 aa12.51□□□□□ -0.41
CSTF2-201ENST00000372972 ZBTB46Q86UZ6 589 aa12.51□□□□□ -0.41
CSTF2-201ENST00000372972 PEX5LQ8IYB4 626 aa12.51□□□□□ -0.41
CSTF2-201ENST00000372972 CLIP4Q8N3C7 705 aa12.51□□□□□ -0.41
CSTF2-201ENST00000372972 TMEM52Q8NDY8 209 aa12.51□□□□□ -0.41
CSTF2-201ENST00000372972 CLDN23Q96B33 292 aa12.51□□□□□ -0.41
CSTF2-201ENST00000372972 SDF2Q99470 211 aa12.51□□□□□ -0.41
CSTF2-201ENST00000372972 ANKRD19PQ9H560 264 aa12.51□□□□□ -0.41
CSTF2-201ENST00000372972 FAM60AQ9NP50 221 aa12.51□□□□□ -0.41
CSTF2-201ENST00000372972 STARD5Q9NSY2 213 aa12.51□□□□□ -0.41
CSTF2-201ENST00000372972 C19orf67A6NJJ6 358 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 CPSF4LA6NMK7 179 aaKnown RBP12.5□□□□□ -0.41
CSTF2-201ENST00000372972 EFCAB9A8MZ26 197 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 AP3D1O14617 1153 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 PTHP01270 115 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 NT5EP21589 574 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 CD27P26842 260 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 ALDH4A1P30038 563 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 AVPR1BP47901 424 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 GIPRP48546 466 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 C21orf59P57076 290 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 NCS1P62166 190 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 LSM11P83369 360 aaKnown RBP eCLIP12.5□□□□□ -0.41
CSTF2-201ENST00000372972 OCA2Q04671 838 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 COL9A2Q14055 689 aaPredicted RBP12.5□□□□□ -0.41
CSTF2-201ENST00000372972 LARS2Q15031 903 aaKnown RBP12.5□□□□□ -0.41
CSTF2-201ENST00000372972 OCLNQ16625 522 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 C11orf91Q3C1V1 193 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 ZCCHC12Q6PEW1 402 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 KLHL35Q6PF15 583 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 LINC00299Q6ZSB3 139 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 ARHGAP22Q7Z5H3 698 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 GNPDA2Q8TDQ7 276 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 DIO2Q92813 273 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 RPL3LQ92901 407 aaKnown RBP12.5□□□□□ -0.41
CSTF2-201ENST00000372972 GPA33Q99795 319 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 ADAP2Q9NPF8 381 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 TBC1D23Q9NUY8 699 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 CLCA2Q9UQC9 943 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 ZNF443Q9Y2A4 671 aaPredicted RBP12.5□□□□□ -0.41
CSTF2-201ENST00000372972 SGK494L7N484 410 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 HCRTR1O43613 425 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 UBXN7O94888 489 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 CSF2P04141 144 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 WNT1P04628 370 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 IFI6P09912 130 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 ALOX5P09917 674 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 CDH3P22223 829 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 MAOBP27338 520 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 TRHRP34981 398 aaPredicted RBP12.5□□□□□ -0.41
CSTF2-201ENST00000372972 SERPINB10P48595 397 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 CLK1P49759 484 aaKnown RBP12.5□□□□□ -0.41
CSTF2-201ENST00000372972 RAB38P57729 211 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 RGS8P57771 180 aaPredicted RBP12.5□□□□□ -0.41
CSTF2-201ENST00000372972 CDK5Q00535 292 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 DUSP8Q13202 625 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 GINS1Q14691 196 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 ELOCQ15369 112 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 PRICKLE4Q2TBC4 344 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 EXOSC6Q5RKV6 272 aaKnown RBP12.5□□□□□ -0.41
CSTF2-201ENST00000372972 PRPF38BQ5VTL8 546 aaKnown RBP12.5□□□□□ -0.41
CSTF2-201ENST00000372972 MEDAGQ5VYS4 303 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 RRM2BQ7LG56 351 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 ZNF367Q7RTV3 350 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 SLC46A3Q7Z3Q1 461 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 SHISA5Q8N114 240 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 SLC15A4Q8N697 577 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 TCEANCQ8N8B7 351 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 C19orf47Q8N9M1 422 aaKnown RBP12.5□□□□□ -0.41
CSTF2-201ENST00000372972 CDRT4Q8N9R6 151 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 AVL9Q8NBF6 648 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 DYNC2LI1Q8TCX1 351 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 VMP1Q96GC9 406 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 ANKHQ9HCJ1 492 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 SEMA4GQ9NTN9 838 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 TVP23BQ9NYZ1 205 aa12.5□□□□□ -0.41
CSTF2-201ENST00000372972 RPL36Q9Y3U8 105 aaKnown RBP12.5□□□□□ -0.41
CSTF2-201ENST00000372972 AIREO43918 545 aa12.49□□□□□ -0.41
CSTF2-201ENST00000372972 STX11O75558 287 aa12.49□□□□□ -0.41
CSTF2-201ENST00000372972 NADKO95544 446 aaPredicted RBP12.49□□□□□ -0.41
CSTF2-201ENST00000372972 DCNP07585 359 aaKnown RBP12.49□□□□□ -0.41
CSTF2-201ENST00000372972 THBS1P07996 1170 aa12.49□□□□□ -0.41
CSTF2-201ENST00000372972 NCF4Q15080 339 aa12.49□□□□□ -0.41
CSTF2-201ENST00000372972 ARMCX4Q5H9R4 360 aa12.49□□□□□ -0.41
CSTF2-201ENST00000372972 SLC25A30Q5SVS4 291 aa12.49□□□□□ -0.41
CSTF2-201ENST00000372972 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.49□□□□□ -0.41
CSTF2-201ENST00000372972 ZNF730Q6ZMV8 503 aa12.49□□□□□ -0.41
CSTF2-201ENST00000372972 PRICKLE2Q7Z3G6 844 aa12.49□□□□□ -0.41
CSTF2-201ENST00000372972 MCATQ8IVS2 390 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms