RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 HMGN2P46Q86SG4 172 aa16.77■□□□□ 0.28
CD40-202ENST00000372285 VRK2Q86Y07 508 aa16.77■□□□□ 0.28
CD40-202ENST00000372285 RBM45Q8IUH3 476 aaKnown RBP16.77■□□□□ 0.28
CD40-202ENST00000372285 LACC1Q8IV20 430 aa16.77■□□□□ 0.28
CD40-202ENST00000372285 PEX5LQ8IYB4 626 aa16.77■□□□□ 0.28
CD40-202ENST00000372285 ZNF615Q8N8J6 731 aa16.77■□□□□ 0.28
CD40-202ENST00000372285 OR7G1Q8NGA0 311 aa16.77■□□□□ 0.28
CD40-202ENST00000372285 VANGL1Q8TAA9 524 aaPredicted RBP16.77■□□□□ 0.28
CD40-202ENST00000372285 PTPMT1Q8WUK0 201 aaPredicted RBP16.77■□□□□ 0.28
CD40-202ENST00000372285 FBXL20Q96IG2 436 aa16.77■□□□□ 0.28
CD40-202ENST00000372285 ARHGDIGQ99819 225 aa16.77■□□□□ 0.28
CD40-202ENST00000372285 PSD2Q9BQI7 771 aa16.77■□□□□ 0.28
CD40-202ENST00000372285 SLC7A5P2Q9GIP4 190 aa16.77■□□□□ 0.28
CD40-202ENST00000372285 TGIF2Q9GZN2 237 aa16.77■□□□□ 0.28
CD40-202ENST00000372285 SOX17Q9H6I2 414 aaPredicted RBP16.77■□□□□ 0.28
CD40-202ENST00000372285 SLC22A11Q9NSA0 550 aa16.77■□□□□ 0.28
CD40-202ENST00000372285 FAM118AQ9NWS6 357 aa16.77■□□□□ 0.28
CD40-202ENST00000372285 ERVK-19Q9WJR5 959 aa16.77■□□□□ 0.28
CD40-202ENST00000372285 TCRBV16S1A1N1A0A5B0 115 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 GXYLT2A0PJZ3 443 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 FAM86C2PA6NEL3 165 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 SEMA7AO75326 666 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 SCRG1O75711 98 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 TIAF1O95411 115 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 ONECUT2O95948 504 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 HBQ1P09105 142 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 TNNI3P19429 210 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 RPS4Y1P22090 263 aaKnown RBP16.76■□□□□ 0.27
CD40-202ENST00000372285 PSG6Q00889 435 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 MICAQ29983 383 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 EXOC3L2Q2M3D2 409 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 MINDY4Q4G0A6 757 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 VWA2Q5GFL6 755 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 CCNJQ5T5M9 372 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 MFSD4BQ5TF39 518 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 TTC23Q5W5X9 447 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 ZNF619Q8N2I2 560 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 SLC38A9Q8NBW4 561 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 RHBDD1Q8TEB9 315 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 TSLPQ969D9 159 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 CNPPD1Q9BV87 410 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 OR10A5Q9H207 317 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 BATF3Q9NR55 127 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 ZNF232Q9UNY5 417 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 CHST2Q9Y4C5 530 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 IGLV3-12A0A075B6K2 115 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 AGAP5A6NIR3 686 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 EIF4E1BA6NMX2 242 aaKnown RBP16.76■□□□□ 0.27
CD40-202ENST00000372285 C17orf105B2RV13 164 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 M0R3H8 397 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 KIAA0513O60268 411 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 CLPSP04118 112 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 THBS1P07996 1170 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 ATXN8OSP0DMR3 200 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 FGF5P12034 268 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 CSTF2P33240 577 aaKnown RBP eCLIP16.76■□□□□ 0.27
CD40-202ENST00000372285 PGDP52209 483 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 EFNA3P52797 238 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 KCNAB2Q13303 367 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 GANABQ14697 944 aaKnown RBP16.76■□□□□ 0.27
CD40-202ENST00000372285 COLEC12Q5KU26 742 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 KRT80Q6KB66 452 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 TMEM154Q6P9G4 183 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 DEF8Q6ZN54 512 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 PPP1R3BQ86XI6 285 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 TMEM151BQ8IW70 566 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 OR52J3Q8NH60 311 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 FKBP10Q96AY3 582 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 CACYBPQ9HB71 228 aaKnown RBP16.76■□□□□ 0.27
CD40-202ENST00000372285 C11orf16Q9NQ32 467 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 PNPLA3Q9NST1 481 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 OCIAD1Q9NX40 245 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 FTSJ1Q9UET6 329 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 SCOCQ9UIL1 159 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 ZNF443Q9Y2A4 671 aaPredicted RBP16.76■□□□□ 0.27
CD40-202ENST00000372285 HCN4Q9Y3Q4 1203 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 PCDHGA8Q9Y5G5 932 aa16.76■□□□□ 0.27
CD40-202ENST00000372285 SYNDIG1LA6NDD5 238 aa16.75■□□□□ 0.27
CD40-202ENST00000372285 BRINP1O60477 761 aa16.75■□□□□ 0.27
CD40-202ENST00000372285 KCNK2O95069 426 aa16.75■□□□□ 0.27
CD40-202ENST00000372285 DBIP07108 87 aaKnown RBP16.75■□□□□ 0.27
CD40-202ENST00000372285 ITGAMP11215 1152 aa16.75■□□□□ 0.27
CD40-202ENST00000372285 SMIM11AP58511 58 aa16.75■□□□□ 0.27
CD40-202ENST00000372285 IL11RAQ14626 422 aa16.75■□□□□ 0.27
CD40-202ENST00000372285 LARS2Q15031 903 aaKnown RBP16.75■□□□□ 0.27
CD40-202ENST00000372285 ELAVL1Q15717 326 aaKnown RBP16.75■□□□□ 0.27
CD40-202ENST00000372285 NKAIN1Q4KMZ8 207 aa16.75■□□□□ 0.27
CD40-202ENST00000372285 B3GNT8Q7Z7M8 397 aa16.75■□□□□ 0.27
CD40-202ENST00000372285 ATG16L2Q8NAA4 619 aa16.75■□□□□ 0.27
CD40-202ENST00000372285 PLPP5Q8NEB5 264 aa16.75■□□□□ 0.27
CD40-202ENST00000372285 PIK3C3Q8NEB9 887 aa16.75■□□□□ 0.27
CD40-202ENST00000372285 ZNF555Q8NEP9 628 aa16.75■□□□□ 0.27
CD40-202ENST00000372285 OR6T1Q8NGN1 323 aa16.75■□□□□ 0.27
CD40-202ENST00000372285 C16orf52Q8NHV5 167 aa16.75■□□□□ 0.27
CD40-202ENST00000372285 PHF10Q8WUB8 498 aaKnown RBP16.75■□□□□ 0.27
CD40-202ENST00000372285 ATOH1Q92858 354 aaPredicted RBP16.75■□□□□ 0.27
CD40-202ENST00000372285 SENP5Q96HI0 755 aaPredicted RBP16.75■□□□□ 0.27
CD40-202ENST00000372285 VN1R1Q9GZP7 353 aa16.75■□□□□ 0.27
CD40-202ENST00000372285 NMNAT1Q9HAN9 279 aaPredicted RBP16.75■□□□□ 0.27
CD40-202ENST00000372285 PNO1Q9NRX1 252 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms