RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 ACTR10Q9NZ32 417 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 NTMQ9P121 344 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 PSORS1C1Q9UIG5 152 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 U3KQA8 63 aa13.19□□□□□ -0.3
LDB3-204ENST00000372066 SPTY2D1-AS1A0A0U1RR47 76 aa13.18□□□□□ -0.3
LDB3-204ENST00000372066 ZAR1LA6NP61 321 aa13.18□□□□□ -0.3
LDB3-204ENST00000372066 C2orf74A8MZ97 194 aa13.18□□□□□ -0.3
LDB3-204ENST00000372066 PCDH17O14917 1159 aa13.18□□□□□ -0.3
LDB3-204ENST00000372066 PGRMC2O15173 223 aa13.18□□□□□ -0.3
LDB3-204ENST00000372066 VIPP01282 170 aa13.18□□□□□ -0.3
LDB3-204ENST00000372066 UGT2B7P16662 529 aa13.18□□□□□ -0.3
LDB3-204ENST00000372066 GABRB1P18505 474 aa13.18□□□□□ -0.3
LDB3-204ENST00000372066 ELAVL4P26378 380 aaKnown RBP13.18□□□□□ -0.3
LDB3-204ENST00000372066 CRISP1P54107 249 aa13.18□□□□□ -0.3
LDB3-204ENST00000372066 UGT2B15P54855 530 aa13.18□□□□□ -0.3
LDB3-204ENST00000372066 LIM2P55344 173 aa13.18□□□□□ -0.3
LDB3-204ENST00000372066 RAB8AP61006 207 aa13.18□□□□□ -0.3
LDB3-204ENST00000372066 BTN3A2P78410 334 aa13.18□□□□□ -0.3
LDB3-204ENST00000372066 GANABQ14697 944 aaKnown RBP13.18□□□□□ -0.3
LDB3-204ENST00000372066 SYPL1Q16563 259 aa13.18□□□□□ -0.3
LDB3-204ENST00000372066 FGD3Q5JSP0 725 aa13.18□□□□□ -0.3
LDB3-204ENST00000372066 TPRG1LQ5T0D9 272 aa13.18□□□□□ -0.3
LDB3-204ENST00000372066 UBE2UQ5VVX9 321 aa13.18□□□□□ -0.3
LDB3-204ENST00000372066 TCTN3Q6NUS6 607 aa13.18□□□□□ -0.3
LDB3-204ENST00000372066 ABHD13Q7L211 337 aa13.18□□□□□ -0.3
LDB3-204ENST00000372066 PARGQ86W56 976 aa13.18□□□□□ -0.3
LDB3-204ENST00000372066 RBM12BQ8IXT5 1001 aaKnown RBP13.18□□□□□ -0.3
LDB3-204ENST00000372066 DNAJC22Q8N4W6 341 aa13.18□□□□□ -0.3
LDB3-204ENST00000372066 C9orf43Q8TAL5 461 aaPredicted RBP13.18□□□□□ -0.3
LDB3-204ENST00000372066 LMX1AQ8TE12 382 aa13.18□□□□□ -0.3
LDB3-204ENST00000372066 UTP15Q8TED0 518 aaKnown RBP13.18□□□□□ -0.3
LDB3-204ENST00000372066 YIPF6Q96EC8 236 aa13.18□□□□□ -0.3
LDB3-204ENST00000372066 ZNF681Q96N22 645 aa13.18□□□□□ -0.3
LDB3-204ENST00000372066 RASSF1Q9NS23 344 aa13.18□□□□□ -0.3
LDB3-204ENST00000372066 RLIMQ9NVW2 624 aa13.18□□□□□ -0.3
LDB3-204ENST00000372066 NDOR1Q9UHB4 597 aa13.18□□□□□ -0.3
LDB3-204ENST00000372066 PNMA8BQ9ULN7 279 aaPredicted RBP13.18□□□□□ -0.3
LDB3-204ENST00000372066 ARHGEF17Q96PE2 2063 aaPredicted RBP13.18□□□□□ -0.3
LDB3-204ENST00000372066 A0A1W2PRQ8 180 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 DUXAA6NLW8 204 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 CLCA1A8K7I4 914 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 FFAR1O14842 300 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 ZSCAN9O15535 394 aaPredicted RBP13.17□□□□□ -0.3
LDB3-204ENST00000372066 B3GALT2O43825 422 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 UGT2B17O75795 530 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 INMTO95050 263 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 HMGN2P05204 90 aaKnown RBP13.17□□□□□ -0.3
LDB3-204ENST00000372066 ZNF888P0CJ79 500 aaPredicted RBP13.17□□□□□ -0.3
LDB3-204ENST00000372066 OSMP13725 252 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 NME1P15531 152 aaKnown RBP13.17□□□□□ -0.3
LDB3-204ENST00000372066 TLX1P31314 330 aaPredicted RBP13.17□□□□□ -0.3
LDB3-204ENST00000372066 MASP1P48740 699 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 PIGFQ07326 219 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 DGCR6Q14129 220 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 GPR19Q15760 415 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 DEFB133Q30KQ1 61 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 ATAD3BQ5T9A4 648 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 C18orf63Q68DL7 685 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 FIGLAQ6QHK4 219 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 KLHL17Q6TDP4 642 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 SLC16A12Q6ZSM3 486 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 LRRC25Q8N386 305 aaPredicted RBP13.17□□□□□ -0.3
LDB3-204ENST00000372066 ZNF843Q8N446 348 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 UCN3Q969E3 161 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 ELP4Q96EB1 424 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 PRRC1Q96M27 445 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 TRNT1Q96Q11 434 aaKnown RBP13.17□□□□□ -0.3
LDB3-204ENST00000372066 OR2A5Q96R48 311 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 COPS4Q9BT78 406 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 UCK2Q9BZX2 261 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 LYRM4Q9HD34 91 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 GPR27Q9NS67 375 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 ETAA1Q9NY74 926 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 CNOT2Q9NZN8 540 aaKnown RBP13.17□□□□□ -0.3
LDB3-204ENST00000372066 CSNK1G3Q9Y6M4 447 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 SPACA6W5XKT8 324 aa13.17□□□□□ -0.3
LDB3-204ENST00000372066 GSAPA4D1B5 854 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 EFCAB10A6NFE3 127 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 AQP9O43315 295 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 DXOO77932 396 aaKnown RBP13.16□□□□□ -0.3
LDB3-204ENST00000372066 CDK1P06493 297 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 MAGP20916 626 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 CPN2P22792 545 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 UBE2IP63279 158 aaKnown RBP13.16□□□□□ -0.3
LDB3-204ENST00000372066 ALDH6A1Q02252 535 aaKnown RBP13.16□□□□□ -0.3
LDB3-204ENST00000372066 COX10Q12887 443 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 GPR18Q14330 331 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 LASP1Q14847 261 aaKnown RBP13.16□□□□□ -0.3
LDB3-204ENST00000372066 MOGQ16653 247 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 ISXQ2M1V0 245 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 CYP27C1Q4G0S4 372 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 ARHGAP40Q5TG30 622 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 FRMPD2BQ6IN97 320 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 FBXO42Q6P3S6 717 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 GUSBP11Q6P575 273 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 CD300LDQ6UXZ3 194 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 DEF8Q6ZN54 512 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 AHSA2Q719I0 299 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 P2RY8Q86VZ1 359 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 CCDC116Q8IYX3 515 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms