RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 PTX3P26022 381 aaPredicted RBP13.87□□□□□ -0.19
RPF1-202ENST00000370656 MAPK1P28482 360 aa13.87□□□□□ -0.19
RPF1-202ENST00000370656 ASCL1P50553 236 aa13.87□□□□□ -0.19
RPF1-202ENST00000370656 ARFIP1P53367 373 aa13.87□□□□□ -0.19
RPF1-202ENST00000370656 CLDN8P56748 225 aa13.87□□□□□ -0.19
RPF1-202ENST00000370656 RPS6KA2Q15349 733 aa13.87□□□□□ -0.19
RPF1-202ENST00000370656 C8orf82Q6P1X6 216 aaPredicted RBP13.87□□□□□ -0.19
RPF1-202ENST00000370656 FBXW8Q8N3Y1 598 aa13.87□□□□□ -0.19
RPF1-202ENST00000370656 GLB1L3Q8NCI6 653 aaPredicted RBP13.87□□□□□ -0.19
RPF1-202ENST00000370656 OR8K3Q8NH51 312 aa13.87□□□□□ -0.19
RPF1-202ENST00000370656 APIPQ96GX9 242 aa13.87□□□□□ -0.19
RPF1-202ENST00000370656 C18orf12Q96KH6 178 aa13.87□□□□□ -0.19
RPF1-202ENST00000370656 SERPINI1Q99574 410 aa13.87□□□□□ -0.19
RPF1-202ENST00000370656 CNPPD1Q9BV87 410 aa13.87□□□□□ -0.19
RPF1-202ENST00000370656 NDUFAF1Q9Y375 327 aa13.87□□□□□ -0.19
RPF1-202ENST00000370656 JMJD1CQ15652 2540 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 A0A1W2PP18 115 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 C4orf51C9J302 202 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 TGFBR3LH3BV60 316 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 SEMA3DO95025 777 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 ETHE1O95571 254 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 CELA3AP09093 270 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 TNNI3P19429 210 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 BMP5P22003 454 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 IL12AP29459 219 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 DNASE1L1P49184 302 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 UFM1P61960 85 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 RPL38P63173 70 aaKnown RBP13.86□□□□□ -0.19
RPF1-202ENST00000370656 KCNJ2P63252 427 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 FOXO1Q12778 655 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 STX4Q12846 297 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 RUNX2Q13950 521 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 DAZAP2Q15038 168 aaPredicted RBP13.86□□□□□ -0.19
RPF1-202ENST00000370656 DEFB113Q30KQ7 82 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 SPIN4Q56A73 249 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 DEPDC1Q5TB30 811 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 NOXRED1Q6NXP6 359 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 PGM2L1Q6PCE3 622 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 Q71RC1 249 aaPredicted RBP13.86□□□□□ -0.19
RPF1-202ENST00000370656 RIMKLAQ8IXN7 391 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 METTL4Q8N3J2 472 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 FAM47BQ8NA70 645 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 C7orf57Q8NEG2 295 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 OR9I1Q8NGQ6 314 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.86□□□□□ -0.19
RPF1-202ENST00000370656 RNASE6Q93091 150 aaKnown RBP13.86□□□□□ -0.19
RPF1-202ENST00000370656 TEX37Q96LM6 180 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 MTERF1Q99551 399 aaKnown RBP13.86□□□□□ -0.19
RPF1-202ENST00000370656 C1orf50Q9BV19 199 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 OR8D2Q9GZM6 311 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.86□□□□□ -0.19
RPF1-202ENST00000370656 NDE1Q9NXR1 346 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 TUBA8Q9NY65 449 aaPredicted RBP13.86□□□□□ -0.19
RPF1-202ENST00000370656 CCDC167Q9P0B6 97 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 COPS7AQ9UBW8 275 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 CBLCQ9ULV8 474 aa13.86□□□□□ -0.19
RPF1-202ENST00000370656 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.86□□□□□ -0.19
RPF1-202ENST00000370656 FREM3P0C091 2139 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 A0A0G2JN53 185 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 LRIT2A6NDA9 550 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 FAM171A2A8MVW0 826 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 CTNSO60931 367 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 CLEC3AO75596 197 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 NPPAP01160 153 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 KRT16P08779 473 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 CPA2P48052 419 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 RAP1GDS1P52306 607 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 POLR2JP52435 117 aaKnown RBP13.85□□□□□ -0.19
RPF1-202ENST00000370656 HNRNPFP52597 415 aaKnown RBP13.85□□□□□ -0.19
RPF1-202ENST00000370656 RPS13P62277 151 aaKnown RBP13.85□□□□□ -0.19
RPF1-202ENST00000370656 RNF4P78317 190 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 RAE1P78406 368 aaKnown RBP13.85□□□□□ -0.19
RPF1-202ENST00000370656 PHEXP78562 749 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 SERTAD2Q14140 314 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 ADPRMQ3LIE5 342 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 SLC22A10Q63ZE4 541 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 ADNP2Q6IQ32 1131 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 TRIM40Q6P9F5 258 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 KIF18BQ86Y91 864 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.85□□□□□ -0.19
RPF1-202ENST00000370656 LIX1Q8N485 282 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 RNF175Q8N4F7 328 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 DPP10Q8N608 796 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 TMEM52Q8NDY8 209 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 ROPN1LQ96C74 230 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 MS4A6EQ96DS6 147 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 RAB3IPQ96QF0 476 aaPredicted RBP13.85□□□□□ -0.19
RPF1-202ENST00000370656 SERINC2Q96SA4 455 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 REPIN1Q9BWE0 567 aaKnown RBP13.85□□□□□ -0.19
RPF1-202ENST00000370656 MS4A8Q9BY19 250 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 MRPL1Q9BYD6 325 aaKnown RBP13.85□□□□□ -0.19
RPF1-202ENST00000370656 ALOXE3Q9BYJ1 711 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 COPS7BQ9H9Q2 264 aaPredicted RBP13.85□□□□□ -0.19
RPF1-202ENST00000370656 NEUROD4Q9HD90 331 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 BOKQ9UMX3 212 aaPredicted RBP13.85□□□□□ -0.19
RPF1-202ENST00000370656 MAPRE3Q9UPY8 281 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 DLGAP4Q9Y2H0 992 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 WBP11Q9Y2W2 641 aaKnown RBP13.85□□□□□ -0.19
RPF1-202ENST00000370656 ATG4BQ9Y4P1 393 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 POLR3HQ9Y535 204 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms