RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 FAM230AA0A1W2PPH8 454 aa8.1□□□□□ -1.11
ABCA4-201ENST00000370225 G3V3Y1 287 aa8.1□□□□□ -1.11
ABCA4-201ENST00000370225 SDHDO14521 159 aa8.1□□□□□ -1.11
ABCA4-201ENST00000370225 LCKP06239 509 aa8.1□□□□□ -1.11
ABCA4-201ENST00000370225 CPOXP36551 454 aa8.1□□□□□ -1.11
ABCA4-201ENST00000370225 BDH1Q02338 343 aa8.1□□□□□ -1.11
ABCA4-201ENST00000370225 MTFR2Q6P444 385 aa8.1□□□□□ -1.11
ABCA4-201ENST00000370225 ZNF572Q7Z3I7 529 aaPredicted RBP8.1□□□□□ -1.11
ABCA4-201ENST00000370225 MRPL10Q7Z7H8 261 aaKnown RBP8.1□□□□□ -1.11
ABCA4-201ENST00000370225 TCEAL8Q8IYN2 117 aa8.1□□□□□ -1.11
ABCA4-201ENST00000370225 RNF175Q8N4F7 328 aa8.1□□□□□ -1.11
ABCA4-201ENST00000370225 FUBP1Q96AE4 644 aaKnown RBP8.1□□□□□ -1.11
ABCA4-201ENST00000370225 C12orf43Q96C57 262 aaKnown RBP8.1□□□□□ -1.11
ABCA4-201ENST00000370225 SAMD8Q96LT4 415 aa8.1□□□□□ -1.11
ABCA4-201ENST00000370225 OR6C1Q96RD1 312 aa8.1□□□□□ -1.11
ABCA4-201ENST00000370225 ZNF160Q9HCG1 818 aa8.1□□□□□ -1.11
ABCA4-201ENST00000370225 IL26Q9NPH9 171 aa8.1□□□□□ -1.11
ABCA4-201ENST00000370225 C14orf119Q9NWQ9 140 aa8.1□□□□□ -1.11
ABCA4-201ENST00000370225 COPZ2Q9P299 210 aa8.1□□□□□ -1.11
ABCA4-201ENST00000370225 KLHL9Q9P2J3 617 aa8.1□□□□□ -1.11
ABCA4-201ENST00000370225 H0YJX3 145 aa8.1□□□□□ -1.11
ABCA4-201ENST00000370225 ANKRD28O15084 1053 aa8.1□□□□□ -1.11
ABCA4-201ENST00000370225 SYT7O43581 403 aa8.1□□□□□ -1.11
ABCA4-201ENST00000370225 DNAJB1P25685 340 aa8.1□□□□□ -1.11
ABCA4-201ENST00000370225 ETV5P41161 510 aa8.1□□□□□ -1.11
ABCA4-201ENST00000370225 CCL11P51671 97 aa8.1□□□□□ -1.11
ABCA4-201ENST00000370225 IST1P53990 364 aa8.1□□□□□ -1.11
ABCA4-201ENST00000370225 HOXC5Q00444 222 aa8.1□□□□□ -1.11
ABCA4-201ENST00000370225 ARHGAP11AQ6P4F7 1023 aa8.1□□□□□ -1.11
ABCA4-201ENST00000370225 URM1Q9BTM9 101 aaKnown RBP8.1□□□□□ -1.11
ABCA4-201ENST00000370225 KATNBL1Q9H079 304 aa8.1□□□□□ -1.11
ABCA4-201ENST00000370225 NSG1A0A0A6YYJ2 146 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 ADAM12O43184 909 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 CRTAPO75718 401 aaPredicted RBP8.09□□□□□ -1.11
ABCA4-201ENST00000370225 RHCEP18577 417 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 CD68P34810 354 aaPredicted RBP8.09□□□□□ -1.11
ABCA4-201ENST00000370225 TNFRSF4P43489 277 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 ZBED5Q49AG3 693 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 HES5Q5TA89 166 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 TANGO2Q6ICL3 276 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 C7orf43Q8WVR3 580 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 NEIL2Q969S2 332 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 BORCS6Q96GS4 357 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 HS6ST2Q96MM7 605 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 TREX2Q9BQ50 279 aaPredicted RBP8.09□□□□□ -1.11
ABCA4-201ENST00000370225 DUSP23Q9BVJ7 150 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 KLF16Q9BXK1 252 aaPredicted RBP8.09□□□□□ -1.11
ABCA4-201ENST00000370225 TAAR2Q9P1P5 351 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 ABCG2Q9UNQ0 655 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 A0A1W2PPW3 197 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 HOXD8P13378 290 aaPredicted RBP8.09□□□□□ -1.11
ABCA4-201ENST00000370225 PHC1P78364 1004 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 TAP2Q03519 686 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 FADDQ13158 208 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 ZNF789Q5FWF6 425 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 GRHL2Q6ISB3 625 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 CYB561A3Q8NBI2 242 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 STOML3Q8TAV4 291 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 ADAMTS18Q8TE60 1221 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 TM9SF4Q92544 642 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 SPTSSAQ969W0 71 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 RFT1Q96AA3 541 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 ZC3H10Q96K80 434 aaKnown RBP8.09□□□□□ -1.11
ABCA4-201ENST00000370225 OR2S2Q9NQN1 319 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 ARMC1Q9NVT9 282 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 SHOXO15266 292 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 EEDO75530 441 aaKnown RBP8.09□□□□□ -1.11
ABCA4-201ENST00000370225 STSP08842 583 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 TIMP2P16035 220 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 ENDOUP21128 410 aaKnown RBP8.09□□□□□ -1.11
ABCA4-201ENST00000370225 MSR1P21757 451 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 ATP4BP51164 291 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 MCCD1P59942 119 aaPredicted RBP8.09□□□□□ -1.11
ABCA4-201ENST00000370225 GSTM4Q03013 218 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.09□□□□□ -1.11
ABCA4-201ENST00000370225 RPL13AP3Q6NVV1 102 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 PDSS2Q86YH6 399 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 ZNF440Q8IYI8 595 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 ZNF619Q8N2I2 560 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 NELL2Q99435 816 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 DYNLRB1Q9NP97 96 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 CCL26Q9Y258 94 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 PRSS21Q9Y6M0 314 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 RBBP9O75884 186 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 DIRAS3O95661 229 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 DCNP07585 359 aaKnown RBP8.09□□□□□ -1.11
ABCA4-201ENST00000370225 GNAO1P09471 354 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 RPS5P46782 204 aaKnown RBP8.09□□□□□ -1.11
ABCA4-201ENST00000370225 GABRA2P47869 451 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 AKR1C2P52895 323 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 LTC4SQ16873 150 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 MEDAGQ5VYS4 303 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 ARHGAP12Q8IWW6 846 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 NAGSQ8N159 534 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 ADOQ96SZ5 270 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 PPP1R14DQ9NXH3 145 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 MCTS1Q9ULC4 181 aaKnown RBP8.09□□□□□ -1.11
ABCA4-201ENST00000370225 LRP6O75581 1613 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 FBXO45P0C2W1 286 aa8.09□□□□□ -1.11
ABCA4-201ENST00000370225 PRKXP51817 358 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms