RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 COPS3Q9UNS2 423 aa14.9□□□□□ -0.02
FBXO28-201ENST00000366862 H7BY64 318 aa14.9□□□□□ -0.02
FBXO28-201ENST00000366862 SLC16A6O15403 523 aa14.9□□□□□ -0.02
FBXO28-201ENST00000366862 ZNF254O75437 659 aa14.9□□□□□ -0.02
FBXO28-201ENST00000366862 HAPLN1P10915 354 aaPredicted RBP14.9□□□□□ -0.02
FBXO28-201ENST00000366862 CRYZQ08257 329 aaKnown RBP14.9□□□□□ -0.02
FBXO28-201ENST00000366862 MEF2DQ14814 521 aa14.9□□□□□ -0.02
FBXO28-201ENST00000366862 C18orf21Q32NC0 220 aaPredicted RBP14.9□□□□□ -0.02
FBXO28-201ENST00000366862 ALG10BQ5I7T1 473 aa14.9□□□□□ -0.02
FBXO28-201ENST00000366862 PLPP4Q5VZY2 271 aa14.9□□□□□ -0.02
FBXO28-201ENST00000366862 PM20D1Q6GTS8 502 aa14.9□□□□□ -0.02
FBXO28-201ENST00000366862 PAQR8Q8TEZ7 354 aa14.9□□□□□ -0.02
FBXO28-201ENST00000366862 ZBED3Q96IU2 234 aaPredicted RBP14.9□□□□□ -0.02
FBXO28-201ENST00000366862 METTL2AQ96IZ6 378 aaKnown RBP14.9□□□□□ -0.02
FBXO28-201ENST00000366862 PRAP1Q96NZ9 151 aa14.9□□□□□ -0.02
FBXO28-201ENST00000366862 CLMPQ9H6B4 373 aa14.9□□□□□ -0.02
FBXO28-201ENST00000366862 B3GAT2Q9NPZ5 323 aa14.9□□□□□ -0.02
FBXO28-201ENST00000366862 LRFN1Q9P244 771 aa14.9□□□□□ -0.02
FBXO28-201ENST00000366862 RIMBP3CA6NJZ7 1639 aa14.9□□□□□ -0.02
FBXO28-201ENST00000366862 RIMBP3BA6NNM3 1639 aa14.9□□□□□ -0.02
FBXO28-201ENST00000366862 RIMBP3Q9UFD9 1639 aa14.9□□□□□ -0.02
FBXO28-201ENST00000366862 ARHGAP33O14559 1287 aa14.9□□□□□ -0.02
FBXO28-201ENST00000366862 SCG5P05408 212 aa14.9□□□□□ -0.02
FBXO28-201ENST00000366862 ALDOCP09972 364 aaKnown RBP14.9□□□□□ -0.02
FBXO28-201ENST00000366862 ACP2P11117 423 aa14.9□□□□□ -0.02
FBXO28-201ENST00000366862 HMGCLP35914 325 aa14.9□□□□□ -0.02
FBXO28-201ENST00000366862 SMN1Q16637 294 aaKnown RBP14.9□□□□□ -0.02
FBXO28-201ENST00000366862 TMEM35AQ53FP2 167 aa14.9□□□□□ -0.02
FBXO28-201ENST00000366862 SLC35F2Q8IXU6 374 aa14.9□□□□□ -0.02
FBXO28-201ENST00000366862 SLC12A9Q9BXP2 914 aa14.9□□□□□ -0.02
FBXO28-201ENST00000366862 CARS2Q9HA77 564 aaKnown RBP14.9□□□□□ -0.02
FBXO28-201ENST00000366862 PARPBPQ9NWS1 579 aa14.9□□□□□ -0.02
FBXO28-201ENST00000366862 AK6Q9Y3D8 172 aaKnown RBP14.9□□□□□ -0.02
FBXO28-201ENST00000366862 DNMT3AQ9Y6K1 912 aaPredicted RBP14.9□□□□□ -0.02
FBXO28-201ENST00000366862 STATHP02808 62 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 PFKLP17858 780 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 NFYAP23511 347 aaPredicted RBP14.89□□□□□ -0.03
FBXO28-201ENST00000366862 ETV6P41212 452 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 FKBP1BP68106 108 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 AMZ1Q400G9 498 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 ACSM3Q53FZ2 586 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 AVPI1Q5T686 147 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 TMEM163Q8TC26 289 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 GIMAP5Q96F15 307 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 PRRT1Q99946 306 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 GABRA5P31644 462 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 ZNF789Q5FWF6 425 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 LAX1Q8IWV1 398 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 LNX2Q8N448 690 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 OR2T4Q8NH00 348 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 SYNPRQ8TBG9 265 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 SAMD8Q96LT4 415 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 SLC38A3Q99624 504 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 SYT3Q9BQG1 590 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 PRDM9Q9NQV7 894 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 ATG4BQ9Y4P1 393 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 NME7Q9Y5B8 376 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 A0A0G2JLL6 359 aaPredicted RBP14.89□□□□□ -0.03
FBXO28-201ENST00000366862 A0A0U1RQF3 1178 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 SOX1O00570 391 aaPredicted RBP14.89□□□□□ -0.03
FBXO28-201ENST00000366862 DHCR24Q15392 516 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 HMGN3Q15651 99 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 PRRT2Q7Z6L0 340 aaPredicted RBP14.89□□□□□ -0.03
FBXO28-201ENST00000366862 ZNF546Q86UE3 836 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 PTRH1Q86Y79 214 aaKnown RBP14.89□□□□□ -0.03
FBXO28-201ENST00000366862 PLA2G15Q8NCC3 412 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 SLC7A6Q92536 515 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 KCNK12Q9HB15 430 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 COL1A1P02452 1464 aaPredicted RBP14.89□□□□□ -0.03
FBXO28-201ENST00000366862 CASC3O15234 703 aaKnown RBP14.89□□□□□ -0.03
FBXO28-201ENST00000366862 SLC31A1O15431 190 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 TSPAN6O43657 245 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 FOSL1P15407 271 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 BDKRB2P30411 391 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 ADARB1P78563 741 aaKnown RBP14.89□□□□□ -0.03
FBXO28-201ENST00000366862 GPR17Q13304 367 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 LRRC25Q8N386 305 aaPredicted RBP14.89□□□□□ -0.03
FBXO28-201ENST00000366862 ZNF283Q8N7M2 679 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 ZNF454Q8N9F8 522 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 CD200R1Q8TD46 325 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 MTHFD2LQ9H903 347 aaPredicted RBP14.89□□□□□ -0.03
FBXO28-201ENST00000366862 SRA1Q9HD15 236 aaKnown RBP14.89□□□□□ -0.03
FBXO28-201ENST00000366862 C2orf78A6NCI8 922 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 ANKRD28O15084 1053 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 LDB2O43679 373 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 CSTAP01040 98 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 GABRA3P34903 492 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 DBPQ10586 325 aaPredicted RBP14.89□□□□□ -0.03
FBXO28-201ENST00000366862 LRRC26Q2I0M4 334 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 TMEM107Q6UX40 140 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 ZNF440Q8IYI8 595 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 ENTHD1Q8IYW4 607 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 PINK1Q9BXM7 581 aa14.89□□□□□ -0.03
FBXO28-201ENST00000366862 ZNF736B4DX44 427 aaPredicted RBP14.88□□□□□ -0.03
FBXO28-201ENST00000366862 SULT1B1O43704 296 aa14.88□□□□□ -0.03
FBXO28-201ENST00000366862 SDC1P18827 310 aa14.88□□□□□ -0.03
FBXO28-201ENST00000366862 C3orf33Q6P1S2 294 aa14.88□□□□□ -0.03
FBXO28-201ENST00000366862 CLEC14AQ86T13 490 aa14.88□□□□□ -0.03
FBXO28-201ENST00000366862 IGSF8Q969P0 613 aa14.88□□□□□ -0.03
FBXO28-201ENST00000366862 TREX1Q9NSU2 369 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms