RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 SNTG1Q9NSN8 517 aa6.5□□□□□ -1.37
H3F3A-201ENST00000366813 ZNF701Q9NV72 531 aaPredicted RBP6.5□□□□□ -1.37
H3F3A-201ENST00000366813 CWC15Q9P013 229 aaKnown RBP6.5□□□□□ -1.37
H3F3A-201ENST00000366813 KIAA1456Q9P272 454 aa6.5□□□□□ -1.37
H3F3A-201ENST00000366813 PLAGL1Q9UM63 463 aa6.5□□□□□ -1.37
H3F3A-201ENST00000366813 KLF13Q9Y2Y9 288 aaPredicted RBP6.5□□□□□ -1.37
H3F3A-201ENST00000366813 ZNF711Q9Y462 761 aa6.5□□□□□ -1.37
H3F3A-201ENST00000366813 KIAA1549Q9HCM3 1950 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 HEATR5AQ86XA9 2040 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 VWFP04275 2813 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 A0A096LPK6 155 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 TEX13CA0A0J9YWL9 993 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 TMEM272A0A1B0GTI8 110 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 A0A1W2PPH5 198 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 PINLYPA6NC86 204 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 GAGE12JA6NER3 117 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 KDM4EB2RXH2 506 aaPredicted RBP6.49□□□□□ -1.37
H3F3A-201ENST00000366813 NDC80O14777 642 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 PRPSAP2O60256 369 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 WDR1O75083 606 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 EIF2S1P05198 315 aaKnown RBP6.49□□□□□ -1.37
H3F3A-201ENST00000366813 MYZAPP0CAP1 466 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 PSG1P11464 419 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 PAX1P15863 534 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 CA4P22748 312 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 PDHA2P29803 388 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 FMO4P31512 558 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 ARL1P40616 181 aaPredicted RBP6.49□□□□□ -1.37
H3F3A-201ENST00000366813 GPR12P47775 334 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 DPYSQ14117 519 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 TSTQ16762 297 aaKnown RBP6.49□□□□□ -1.37
H3F3A-201ENST00000366813 LDLRAP1Q5SW96 308 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 COLCA1Q6ZS62 124 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 RRM2BQ7LG56 351 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 NT5DC3Q86UY8 548 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 RPS19BP1Q86WX3 136 aaKnown RBP6.49□□□□□ -1.37
H3F3A-201ENST00000366813 DDHD1Q8NEL9 900 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 METTL21AQ8WXB1 218 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 HDAC2Q92769 488 aaKnown RBP6.49□□□□□ -1.37
H3F3A-201ENST00000366813 PIK3IP1Q96FE7 263 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 MARK4Q96L34 752 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 ZNF285Q96NJ3 590 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 PEBP4Q96S96 227 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 SNRNP25Q9BV90 132 aaKnown RBP6.49□□□□□ -1.37
H3F3A-201ENST00000366813 HEMGNQ9BXL5 484 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 ESRP2Q9H6T0 727 aaKnown RBP6.49□□□□□ -1.37
H3F3A-201ENST00000366813 MVB12BQ9H7P6 319 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 RBM22Q9NW64 420 aaKnown RBP eCLIP6.49□□□□□ -1.377e-6■■■■□ 24.6
H3F3A-201ENST00000366813 TAS2R10Q9NYW0 307 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 PCSK1NQ9UHG2 260 aa6.49□□□□□ -1.37
H3F3A-201ENST00000366813 DEFB108AA8MXU0 73 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 EEF1E1-BLOC1S5C9J1V9 151 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 EEF1E1O43324 174 aaKnown RBP6.48□□□□□ -1.37
H3F3A-201ENST00000366813 SLC25A17O43808 307 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 CTSVO60911 334 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 MMP2P08253 660 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 TNFRSF1BP20333 461 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 MSH3P20585 1137 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 PON1P27169 355 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 SHMT2P34897 504 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 CD86P42081 329 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 HLCSP50747 726 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 CCR9P51686 369 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 RPL7AP62424 266 aaKnown RBP6.48□□□□□ -1.37
H3F3A-201ENST00000366813 MAT1AQ00266 395 aaKnown RBP6.48□□□□□ -1.37
H3F3A-201ENST00000366813 OGDHQ02218 1023 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 ERMARDQ5T6L9 678 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 SERTAD4-AS1Q5TG53 156 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 FRMPD2BQ6IN97 320 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 FAM180BQ6P0A1 224 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 FAM151BQ6UXP7 276 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 PLEKHM3Q6ZWE6 761 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 TRILQ7L0X0 811 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 CADM3Q8N126 398 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 KIF2BQ8N4N8 673 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 C2orf73Q8N5S3 287 aaPredicted RBP6.48□□□□□ -1.37
H3F3A-201ENST00000366813 AMER3Q8N944 861 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 OR5AR1Q8NGP9 310 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 M1APQ8TC57 530 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 TFGQ92734 400 aaPredicted RBP6.48□□□□□ -1.37
H3F3A-201ENST00000366813 C10orf90Q96M02 699 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 CYTH2Q99418 400 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 OR52A5Q9H2C5 316 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 KLHL31Q9H511 634 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 TRIM45Q9H8W5 580 aaPredicted RBP6.48□□□□□ -1.37
H3F3A-201ENST00000366813 ZDHHC11Q9H8X9 412 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 MAGEE1Q9HCI5 957 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 MMP25Q9NPA2 562 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 SIX2Q9NPC8 291 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 DEPPQ9NTK1 212 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 C20orf141Q9NUB4 165 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 C14orf105Q9NVL8 296 aa6.48□□□□□ -1.37
H3F3A-201ENST00000366813 TDRKHQ9Y2W6 561 aaKnown RBP6.48□□□□□ -1.37
H3F3A-201ENST00000366813 MED12Q93074 2177 aa6.47□□□□□ -1.37
H3F3A-201ENST00000366813 SIGLEC16A6NMB1 481 aa6.47□□□□□ -1.37
H3F3A-201ENST00000366813 EBAG9O00559 213 aa6.47□□□□□ -1.37
H3F3A-201ENST00000366813 LDLRAD4O15165 306 aa6.47□□□□□ -1.37
H3F3A-201ENST00000366813 HLA-DQB2P05538 268 aa6.47□□□□□ -1.37
H3F3A-201ENST00000366813 UBL4AP11441 157 aa6.47□□□□□ -1.37
H3F3A-201ENST00000366813 ENO3P13929 434 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms