RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 CDKL4Q5MAI5 379 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 FIGLAQ6QHK4 219 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 AGTRAPQ6RW13 159 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 ZNF474Q6S9Z5 364 aaPredicted RBP7.29□□□□□ -1.24
YBX3-204ENST00000366290 SUSD1Q6UWL2 747 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 EXOC3L1Q86VI1 746 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 LCA5Q86VQ0 697 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 SRRM1Q8IYB3 904 aaKnown RBP7.29□□□□□ -1.24
YBX3-204ENST00000366290 CNPY4Q8N129 248 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 STAG3L4Q8TBR4 150 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 MR1Q95460 341 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 ESAMQ96AP7 390 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 TLCD1Q96CP7 247 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 PGM2Q96G03 612 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 OR4K3Q96R72 315 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 SH3GL2Q99962 352 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 MRPL57Q9BQC6 102 aaKnown RBP7.29□□□□□ -1.24
YBX3-204ENST00000366290 SPRTNQ9H040 489 aaPredicted RBP7.29□□□□□ -1.24
YBX3-204ENST00000366290 ATG10Q9H0Y0 220 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 SLC25A18Q9H1K4 315 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 ARL15Q9NXU5 204 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 NUDT4Q9NZJ9 180 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 PTBP2Q9UKA9 531 aaKnown RBP7.29□□□□□ -1.24
YBX3-204ENST00000366290 FARSAQ9Y285 508 aaKnown RBP7.29□□□□□ -1.24
YBX3-204ENST00000366290 NUP210LQ5VU65 1888 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 A0A1B0GX78 115 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 NCF1BA6NI72 391 aaPredicted RBP7.28□□□□□ -1.24
YBX3-204ENST00000366290 NCF1CA8MVU1 366 aaPredicted RBP7.28□□□□□ -1.24
YBX3-204ENST00000366290 RGS16O15492 202 aaPredicted RBP7.28□□□□□ -1.24
YBX3-204ENST00000366290 PLIN3O60664 434 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 GLRA3O75311 464 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 SPAG7O75391 227 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 GSTA1P08263 222 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 ANXA5P08758 320 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 RBP1P09455 135 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 HIST1H2AGP0C0S8 130 aaPredicted RBP7.28□□□□□ -1.24
YBX3-204ENST00000366290 PRKAR1AP10644 381 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 NCF1P14598 390 aaPredicted RBP7.28□□□□□ -1.24
YBX3-204ENST00000366290 EPORP19235 508 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 HIST1H2ADP20671 130 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 ITGAXP20702 1163 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 ARSFP54793 590 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 ABATP80404 500 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 DCDP81605 110 aaKnown RBP7.28□□□□□ -1.24
YBX3-204ENST00000366290 DEFB110Q30KQ9 67 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 DEFB109BQ30KR1 87 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 GXYLT1Q4G148 440 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 NKAIN1Q4KMZ8 207 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 ATP1A1-AS1Q5TC04 95 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 LIPMQ5VYY2 423 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 SULT1C3Q6IMI6 304 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 ZNF425Q6IV72 752 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 FBXO42Q6P3S6 717 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 FRA10AC1Q70Z53 315 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 UEVLDQ8IX04 471 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 UBTD2Q8WUN7 234 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 N4BP2L2Q92802 583 aaPredicted RBP7.28□□□□□ -1.24
YBX3-204ENST00000366290 EXT2Q93063 718 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 PYCR2Q96C36 320 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 APOPT1Q96IL0 206 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 ZNF347Q96SE7 839 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 RUFY1Q96T51 708 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 H2AFJQ9BTM1 129 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 TM2D2Q9BX73 214 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 TRIM4Q9C037 500 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 SLC26A1Q9H2B4 701 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 WDR54Q9H977 334 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 VIPAS39Q9H9C1 493 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 MLXIPLQ9NP71 852 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 CPSF2Q9P2I0 782 aaKnown RBP7.28□□□□□ -1.24
YBX3-204ENST00000366290 TAC3Q9UHF0 121 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 DCDC2Q9UHG0 476 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 SNX7Q9UNH6 387 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 KLHL20Q9Y2M5 609 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 PLLPQ9Y342 182 aa7.28□□□□□ -1.24
YBX3-204ENST00000366290 DOPEY2Q9Y3R5 2298 aa7.27□□□□□ -1.24
YBX3-204ENST00000366290 SCN3AQ9NY46 2000 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 KCNE1BA0A087WTH5 132 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 A8MT66 165 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 SUPT3HB4E1H0 165 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 C9J4A7 227 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 MCIDASD6RGH6 385 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 G3V2L1 256 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 COPEO14579 308 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 SUPT3HO75486 399 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 CEACAM4O75871 244 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 CCNDBP1O95273 360 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 SIX3O95343 332 aaPredicted RBP7.27□□□□□ -1.25
YBX3-204ENST00000366290 NUDT3O95989 172 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 MYZAPP0CAP1 466 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 EZRP15311 586 aaKnown RBP7.27□□□□□ -1.25
YBX3-204ENST00000366290 HRH2P25021 359 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 CMPK1P30085 196 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 RPA3P35244 121 aaPredicted RBP7.27□□□□□ -1.25
YBX3-204ENST00000366290 SOX2P48431 317 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 HNMTP50135 292 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 PROK1P58294 105 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 ERV3-1Q14264 604 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 PRTGQ2VWP7 1150 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 TTMPQ5BVD1 217 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms