RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 SLC22A25Q6T423 547 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 RPS27LQ71UM5 84 aaKnown RBP12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 NUDT9Q9BW91 350 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 SLC6A5Q9Y345 797 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 UGT2B7P16662 529 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 LILRA4P59901 499 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 CLVS2Q5SYC1 327 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 PLXDC1Q8IUK5 500 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 ZNF439Q8NDP4 499 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 ZFP90Q8TF47 636 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 ACTRT3Q9BYD9 372 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 SLC6A14Q9UN76 642 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 PGCP20142 388 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 TSFMP43897 325 aaKnown RBP12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 ERVFC1P60507 584 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 LIPJQ5W064 366 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 KIAA1211LQ6NV74 962 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 OR9A1PQ8NGU1 263 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 TMIGD2Q96BF3 282 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 DEFB126Q9BYW3 111 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 ARHGEF28Q8N1W1 1705 aaKnown RBP12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 PRSS51A0A1B0GVH4 220 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 J3KR12 359 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 HAS3O00219 553 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 MAN2B1O00754 1011 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 IGHEP01854 428 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 FHP07954 510 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 SERINC3Q13530 473 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 MVB12BQ9H7P6 319 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 MED6O75586 246 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 JUPP14923 745 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 HTR1EP28566 365 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 FAM46BQ96A09 425 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 KLHDC7BQ96G42 594 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 PCED1BQ96HM7 432 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 TMEM175Q9BSA9 504 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 TECPR2O15040 1411 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 MANBAO00462 879 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 GBAP04062 536 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 PREPP48147 710 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 CMIPQ8IY22 773 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 MITD1Q8WV92 249 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 CNN2Q99439 309 aaKnown RBP12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 ZNF559Q9BR84 538 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 PAPOLGQ9BWT3 736 aaKnown RBP12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 CNTNAP3Q9BZ76 1288 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 EVA1AQ9H8M9 152 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 NOCTQ9UK39 431 aaKnown RBP12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 FCF1Q9Y324 198 aaKnown RBP12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 PLSCR5A0PG75 271 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 ARAFP10398 606 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 DNAJB13P59910 316 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 RPS15AP62244 130 aaKnown RBP12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 EEF1A2Q05639 463 aaKnown RBP12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 ARL16Q0P5N6 197 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 HMGN3Q15651 99 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 TSPYL5Q86VY4 417 aaPredicted RBP12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 FOXJ1Q92949 421 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 LMF2Q9BU23 707 aaKnown RBP12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 SMIM28A0A1B0GU29 152 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 MEIS3P2A8K0S8 358 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 FBLP22087 321 aaKnown RBP12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 UBE2KP61086 200 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 HNRNPKP61978 463 aaKnown RBP eCLIP12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 NAPRTQ6XQN6 538 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 NANPQ8TBE9 248 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 THAP7Q9BT49 309 aaPredicted RBP12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 MAGIXQ9H6Y5 334 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 TSPAN11A1L157 253 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 CST3P01034 146 aaPredicted RBP12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 UBL4AP11441 157 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 BDKRB1P46663 353 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 FASLGP48023 281 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 HACD2Q6Y1H2 254 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 KBTBD6Q86V97 674 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 CHTF18Q8WVB6 975 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 CHFRQ96EP1 664 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 B3GNT3Q9Y2A9 372 aa12.58□□□□□ -0.4
SRGAP3-201ENST00000360413 A8MU76 341 aa12.57□□□□□ -0.4
SRGAP3-201ENST00000360413 BPIP17213 487 aa12.57□□□□□ -0.4
SRGAP3-201ENST00000360413 UGCGQ16739 394 aa12.57□□□□□ -0.4
SRGAP3-201ENST00000360413 NKPD1Q17RQ9 610 aa12.57□□□□□ -0.4
SRGAP3-201ENST00000360413 FAM69AQ5T7M9 428 aa12.57□□□□□ -0.4
SRGAP3-201ENST00000360413 TMPRSS7Q7RTY8 843 aa12.57□□□□□ -0.4
SRGAP3-201ENST00000360413 GAB3Q8WWW8 586 aa12.57□□□□□ -0.4
SRGAP3-201ENST00000360413 MR1Q95460 341 aa12.57□□□□□ -0.4
SRGAP3-201ENST00000360413 SYNPO2LQ9H987 977 aa12.57□□□□□ -0.4
SRGAP3-201ENST00000360413 LOC102725191A0A1B0GVB3 256 aa12.57□□□□□ -0.4
SRGAP3-201ENST00000360413 KNG1P01042 644 aa12.57□□□□□ -0.4
SRGAP3-201ENST00000360413 ACP5P13686 325 aa12.57□□□□□ -0.4
SRGAP3-201ENST00000360413 CBR1P16152 277 aa12.57□□□□□ -0.4
SRGAP3-201ENST00000360413 ITGB5P18084 799 aa12.57□□□□□ -0.4
SRGAP3-201ENST00000360413 GPM6BQ13491 265 aa12.57□□□□□ -0.4
SRGAP3-201ENST00000360413 WDR20Q8TBZ3 569 aa12.57□□□□□ -0.4
SRGAP3-201ENST00000360413 TBC1D20Q96BZ9 403 aa12.57□□□□□ -0.4
SRGAP3-201ENST00000360413 FCRL5Q96RD9 977 aa12.57□□□□□ -0.4
SRGAP3-201ENST00000360413 TSPAN10Q9H1Z9 355 aaPredicted RBP12.57□□□□□ -0.4
SRGAP3-201ENST00000360413 CDH20Q9HBT6 801 aa12.57□□□□□ -0.4
SRGAP3-201ENST00000360413 ZNF286AQ9HBT8 521 aa12.57□□□□□ -0.4
SRGAP3-201ENST00000360413 NAV1Q8NEY1 1877 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms