RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 USP53Q70EK8 1073 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 C19orf47Q8N9M1 422 aaKnown RBP11.85□□□□□ -0.51
GGPS1-202ENST00000358966 CADM4Q8NFZ8 388 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 OR7G2Q8NG99 324 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 NT5CQ8TCD5 201 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 TBC1D20Q96BZ9 403 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 TREX2Q9BQ50 279 aaPredicted RBP11.85□□□□□ -0.51
GGPS1-202ENST00000358966 USB1Q9BQ65 265 aaKnown RBP11.85□□□□□ -0.51
GGPS1-202ENST00000358966 CAPN10Q9HC96 672 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 RPRD1BQ9NQG5 326 aaKnown RBP11.85□□□□□ -0.51
GGPS1-202ENST00000358966 ACSS1Q9NUB1 689 aaPredicted RBP11.85□□□□□ -0.51
GGPS1-202ENST00000358966 RLIMQ9NVW2 624 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 THUMPD1Q9NXG2 353 aaKnown RBP11.85□□□□□ -0.51
GGPS1-202ENST00000358966 TAS2R7Q9NYW3 318 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 BAG5Q9UL15 447 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 PCDHGA2Q9Y5H1 932 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 A0A0A6YYC8 382 aaPredicted RBP11.85□□□□□ -0.51
GGPS1-202ENST00000358966 C5orf58C9J3I9 102 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 H0YJX3 145 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 I3L1I5 382 aaPredicted RBP11.85□□□□□ -0.51
GGPS1-202ENST00000358966 BCAT2O15382 392 aaPredicted RBP11.85□□□□□ -0.51
GGPS1-202ENST00000358966 FGF17O60258 216 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 PAHP00439 452 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 SMIM10L1P0DMW3 83 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 XKP51811 444 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 TRA2BP62995 288 aaKnown RBP11.85□□□□□ -0.51
GGPS1-202ENST00000358966 TNFRSF17Q02223 184 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 SIM2Q14190 667 aaPredicted RBP11.85□□□□□ -0.51
GGPS1-202ENST00000358966 PUM1Q14671 1186 aaKnown RBP eCLIP11.85□□□□□ -0.51
GGPS1-202ENST00000358966 RNF44Q7L0R7 432 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 LACC1Q8IV20 430 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 CAMKVQ8NCB2 501 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 SRFBP1Q8NEF9 429 aaKnown RBP11.85□□□□□ -0.51
GGPS1-202ENST00000358966 BPIFB6Q8NFQ5 453 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 GPR32P1Q8NGA4 272 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 SMIM10Q96HG1 83 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 COL21A1Q96P44 957 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 NELL2Q99435 816 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 IFT22Q9H7X7 185 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 EHD3Q9NZN3 535 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 HCN3Q9P1Z3 774 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 CLCA2Q9UQC9 943 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 PCDHGB3Q9Y5G1 929 aa11.85□□□□□ -0.51
GGPS1-202ENST00000358966 B3GALT2O43825 422 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 TBX19O60806 448 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 OR7A10O76100 309 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 DLGAP3O95886 979 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 PROS1P07225 676 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 POU2F1P14859 743 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 SOX18P35713 384 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 CAPZBP47756 277 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 DHPSP49366 369 aaPredicted RBP11.84□□□□□ -0.51
GGPS1-202ENST00000358966 CDH12P55289 794 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 OR1D5P58170 312 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 ADARB1P78563 741 aaKnown RBP11.84□□□□□ -0.51
GGPS1-202ENST00000358966 ZNF630Q2M218 657 aaPredicted RBP11.84□□□□□ -0.51
GGPS1-202ENST00000358966 TRMT12Q53H54 448 aaKnown RBP11.84□□□□□ -0.51
GGPS1-202ENST00000358966 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.84□□□□□ -0.51
GGPS1-202ENST00000358966 ATAD3CQ5T2N8 411 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 REEP3Q6NUK4 255 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 GKN2Q86XP6 184 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 SLC25A45Q8N413 288 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 OR4D11Q8NGI4 311 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 OR5K1Q8NHB7 308 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 SLC22A8Q8TCC7 542 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 PRR14Q9BWN1 585 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 PAQR5Q9NXK6 330 aaPredicted RBP11.84□□□□□ -0.51
GGPS1-202ENST00000358966 NUP50Q9UKX7 468 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 ANGPT4Q9Y264 503 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 ENTPD2Q9Y5L3 495 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 ADAMTS9Q9P2N4 1935 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 LINC01387J3KSC0 135 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 FRS3O43559 492 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 TPST2O60704 377 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 PIAS2O75928 621 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 CHRM4P08173 479 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 CSNK2A2P19784 350 aaPredicted RBP11.84□□□□□ -0.51
GGPS1-202ENST00000358966 BUD31P41223 144 aaPredicted RBP11.84□□□□□ -0.51
GGPS1-202ENST00000358966 OR2I1PQ8NGU4 316 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 LHFPL5Q8TAF8 219 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 MARC2Q969Z3 335 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 RIBC2Q9H4K1 309 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 SOHLH2Q9NX45 425 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 ZNF780BQ9Y6R6 833 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 RNF215Q9Y6U7 377 aa11.84□□□□□ -0.51
GGPS1-202ENST00000358966 TEX51A0A1B0GUA7 166 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 M0R3H8 397 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 NR2F1P10589 423 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 MYF6P23409 242 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 GSTM2P28161 218 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 FASLGP48023 281 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 ITGA1P56199 1179 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 HNRNPKP61978 463 aaKnown RBP eCLIP11.83□□□□□ -0.52
GGPS1-202ENST00000358966 SPIBQ01892 262 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 DGAT2L6Q6ZPD8 337 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 ABHD13Q7L211 337 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 CAMKK1Q8N5S9 505 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 SLC16A11Q8NCK7 471 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 OR9Q2Q8NGE9 314 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 PSMA8Q8TAA3 256 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms