RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 KCTD3Q9Y597 815 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 KLK4Q9Y5K2 254 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 CDHR4A6H8M9 788 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 HCRTR2O43614 444 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 S1PR4O95977 384 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 JUPP14923 745 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 GNB3P16520 340 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 ZNF30P17039 623 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 SERPINF1P36955 418 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 VEZF1Q14119 521 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 PCBP2Q15366 365 aaKnown RBP eCLIP8.34□□□□□ -1.07
COL6A6-201ENST00000358511 FIP1L1Q6UN15 594 aaKnown RBP8.34□□□□□ -1.07
COL6A6-201ENST00000358511 GALNT10Q86SR1 603 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 LNX2Q8N448 690 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 CLDN22Q8N7P3 220 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 MRPS23Q9Y3D9 190 aaKnown RBP8.34□□□□□ -1.07
COL6A6-201ENST00000358511 STYXL1Q9Y6J8 313 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 ZNF318Q5VUA4 2279 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 RREB1Q92766 1687 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 CICQ96RK0 1608 aaPredicted RBP8.34□□□□□ -1.07
COL6A6-201ENST00000358511 CD3GP09693 182 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 JUNBP17275 347 aaPredicted RBP8.34□□□□□ -1.07
COL6A6-201ENST00000358511 GCAP28676 217 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 ETV3P41162 512 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 SELENOWP63302 87 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 HSD11B2P80365 405 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 CDC20Q12834 499 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 SLAMF1Q13291 335 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 DECR1Q16698 335 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 ZNF792Q3KQV3 632 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 LRRC73Q5JTD7 316 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 C7orf61Q8IZ16 206 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 OR6N2Q8NGY6 317 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 ZFAND1Q8TCF1 268 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 POLDIP3Q9BY77 421 aaKnown RBP8.34□□□□□ -1.07
COL6A6-201ENST00000358511 OR51B5Q9H339 312 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 NOX3Q9HBY0 568 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 Q9N2J8 555 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 TBC1D3DA0A087WVF3 549 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 TBC1D3IA0A087WXS9 549 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 TBC1D3EA0A087X179 549 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 TBC1D3KA0A087X1G2 549 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 TBC1D3FA6NER0 549 aaPredicted RBP8.34□□□□□ -1.07
COL6A6-201ENST00000358511 TBC1D3LB9A6J9 549 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 CACNG3O60359 315 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 FADS1O60427 444 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 TBC1D3HP0C7X1 549 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 TBC1D3GQ6DHY5 549 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 TBC1D3CQ6IPX1 549 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 TBC1D3Q8IZP1 549 aaPredicted RBP8.34□□□□□ -1.07
COL6A6-201ENST00000358511 OR5P2Q8WZ92 322 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 THSD1Q9NS62 852 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 TAC3Q9UHF0 121 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 SCML2Q9UQR0 700 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 ANKRD36A6QL64 1941 aa8.34□□□□□ -1.07
COL6A6-201ENST00000358511 CLDN7O95471 211 aa8.34□□□□□ -1.08
COL6A6-201ENST00000358511 GAAP10253 952 aa8.34□□□□□ -1.08
COL6A6-201ENST00000358511 ACRV1P26436 265 aa8.34□□□□□ -1.08
COL6A6-201ENST00000358511 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.34□□□□□ -1.08
COL6A6-201ENST00000358511 VARS2Q5ST30 1063 aaKnown RBP8.34□□□□□ -1.08
COL6A6-201ENST00000358511 CLEC4DQ8WXI8 215 aa8.34□□□□□ -1.08
COL6A6-201ENST00000358511 CRB3Q9BUF7 120 aa8.34□□□□□ -1.08
COL6A6-201ENST00000358511 CLEC4EQ9ULY5 219 aa8.34□□□□□ -1.08
COL6A6-201ENST00000358511 SLC16A5O15375 505 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 ZBTB48P10074 688 aaPredicted RBP8.33□□□□□ -1.08
COL6A6-201ENST00000358511 MGAT3Q09327 533 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 SLC9B2Q86UD5 537 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 DGAT2Q96PD7 388 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 C12orf57Q99622 126 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 PKMYT1Q99640 499 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 CTRCQ99895 268 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 XYLT2Q9H1B5 865 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 PNO1Q9NRX1 252 aaKnown RBP8.33□□□□□ -1.08
COL6A6-201ENST00000358511 SCGB1D1O95968 90 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 SCG5P05408 212 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 ADRB1P08588 477 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 ETFAP13804 333 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 PTNP21246 168 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 BDKRB1P46663 353 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 RABGGTBP53611 331 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 PUS10Q3MIT2 529 aaKnown RBP8.33□□□□□ -1.08
COL6A6-201ENST00000358511 TSSK4Q6SA08 328 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 SPRED1Q7Z699 444 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 TPRA1Q86W33 373 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 HS6ST2Q96MM7 605 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 STRA6Q9BX79 667 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 SUV39H2Q9H5I1 410 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 BRF2Q9HAW0 419 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 INPP5EQ9NRR6 644 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 RPS10-NUDT3A0A1W2PQS6 291 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 CTDSP2O14595 271 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 C1QBP02746 253 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 SNRNP70P08621 437 aaKnown RBP8.33□□□□□ -1.08
COL6A6-201ENST00000358511 ADORA3P0DMS8 318 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 RPS10P46783 165 aaKnown RBP8.33□□□□□ -1.08
COL6A6-201ENST00000358511 TAS2R20P59543 309 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 PAGE3Q5JUK9 113 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 ISCA2Q86U28 154 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 TMEM102Q8N9M5 508 aaPredicted RBP8.33□□□□□ -1.08
COL6A6-201ENST00000358511 FAM46BQ96A09 425 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms