RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 L3HYPDHQ96EM0 354 aa9.69□□□□□ -0.86
CAPN3-204ENST00000356316 SLC35A4Q96G79 324 aa9.69□□□□□ -0.86
CAPN3-204ENST00000356316 APIPQ96GX9 242 aa9.69□□□□□ -0.86
CAPN3-204ENST00000356316 SFXN2Q96NB2 322 aa9.69□□□□□ -0.86
CAPN3-204ENST00000356316 BTBD9Q96Q07 612 aa9.69□□□□□ -0.86
CAPN3-204ENST00000356316 TMEM237Q96Q45 408 aa9.69□□□□□ -0.86
CAPN3-204ENST00000356316 TUBA1CQ9BQE3 449 aa9.69□□□□□ -0.86
CAPN3-204ENST00000356316 SFXN3Q9BWM7 321 aa9.69□□□□□ -0.86
CAPN3-204ENST00000356316 RBM24Q9BX46 236 aaKnown RBP9.69□□□□□ -0.86
CAPN3-204ENST00000356316 ACPTQ9BZG2 426 aa9.69□□□□□ -0.86
CAPN3-204ENST00000356316 OR2B2Q9GZK3 357 aa9.69□□□□□ -0.86
CAPN3-204ENST00000356316 STMN4Q9H169 189 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-204ENST00000356316 LIME1Q9H400 295 aa9.69□□□□□ -0.86
CAPN3-204ENST00000356316 ANKRA2Q9H9E1 313 aa9.69□□□□□ -0.86
CAPN3-204ENST00000356316 MID1IP1Q9NPA3 183 aa9.69□□□□□ -0.86
CAPN3-204ENST00000356316 MIEF1Q9NQG6 463 aa9.69□□□□□ -0.86
CAPN3-204ENST00000356316 NDRG3Q9UGV2 375 aa9.69□□□□□ -0.86
CAPN3-204ENST00000356316 MRTO4Q9UKD2 239 aaKnown RBP9.69□□□□□ -0.86
CAPN3-204ENST00000356316 PLEKHA6Q9Y2H5 1048 aa9.69□□□□□ -0.86
CAPN3-204ENST00000356316 MRPS18CQ9Y3D5 142 aaKnown RBP9.69□□□□□ -0.86
CAPN3-204ENST00000356316 TIMM22Q9Y584 194 aa9.69□□□□□ -0.86
CAPN3-204ENST00000356316 WIF1Q9Y5W5 379 aa9.69□□□□□ -0.86
CAPN3-204ENST00000356316 CLCA1A8K7I4 914 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 H3BQF6 201 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 KIF2AO00139 706 aaPredicted RBP9.68□□□□□ -0.86
CAPN3-204ENST00000356316 RIPK2O43353 540 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 PLOD3O60568 738 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 TSPAN2O60636 221 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 COQ9O75208 318 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 SLITRK5O94991 958 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 MYL2P10916 166 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 DPP4P27487 766 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 STARP49675 285 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 NCBP2P52298 156 aaKnown RBP eCLIP9.68□□□□□ -0.86
CAPN3-204ENST00000356316 CORO7P57737 925 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 EEFSECP57772 596 aaKnown RBP9.68□□□□□ -0.86
CAPN3-204ENST00000356316 RAE1P78406 368 aaKnown RBP9.68□□□□□ -0.86
CAPN3-204ENST00000356316 KEAP1Q14145 624 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 ZNHIT3Q15649 155 aaPredicted RBP9.68□□□□□ -0.86
CAPN3-204ENST00000356316 CFAP157Q5JU67 520 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 SH2D4BQ5SQS7 431 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 OR2A2Q6IF42 318 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 GALNT18Q6P9A2 607 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 LUZP2Q86TE4 346 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 GRAMD2AQ8IUY3 354 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 C9orf106Q8NAJ2 232 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 OR4K17Q8NGC6 315 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 KIF18AQ8NI77 898 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 VSTM2LQ96N03 204 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 EBPLQ9BY08 206 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 CXXC4Q9H2H0 198 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 PIGMQ9H3S5 423 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 PTGES2Q9H7Z7 377 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 FOLH1BQ9HBA9 442 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 JKAMPQ9P055 326 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 PPP4R1LQ9P1A2 415 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 PSMC3IPQ9P2W1 217 aaPredicted RBP9.68□□□□□ -0.86
CAPN3-204ENST00000356316 TBK1Q9UHD2 729 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 GRID1Q9ULK0 1009 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 WBP11Q9Y2W2 641 aaKnown RBP9.68□□□□□ -0.86
CAPN3-204ENST00000356316 ITPR3Q14573 2671 aa9.68□□□□□ -0.86
CAPN3-204ENST00000356316 DOCK7Q96N67 2140 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 SERTM1A2A2V5 107 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 PLOD2O00469 737 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 DIAPH2O60879 1101 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 GOSR1O95249 250 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 RAF1P04049 648 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 JUNP05412 331 aaKnown RBP9.67□□□□□ -0.86
CAPN3-204ENST00000356316 KLK2P20151 261 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 DDCP20711 480 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 TCEA1P23193 301 aaKnown RBP9.67□□□□□ -0.86
CAPN3-204ENST00000356316 GRK2P25098 689 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 GCAP28676 217 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 SOX18P35713 384 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 SLCO1A2P46721 670 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 CCT5P48643 541 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 PSMD4P55036 377 aaKnown RBP9.67□□□□□ -0.86
CAPN3-204ENST00000356316 GFRA1P56159 465 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 DSCR4P56555 118 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-204ENST00000356316 ZNF763Q0D2J5 394 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 ZNF155Q12901 538 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-204ENST00000356316 FOXF2Q12947 444 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 SLC29A2Q14542 456 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 BCL2A1Q16548 175 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 DECR1Q16698 335 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 CYP27C1Q4G0S4 372 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 TGIF2LYQ8IUE0 185 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 MEIOBQ8N635 442 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 EFHD2Q96C19 240 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-204ENST00000356316 DACH2Q96NX9 599 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 UCN2Q96RP3 112 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 KCNA7Q96RP8 456 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 TMUB1Q9BVT8 246 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 IQCGQ9H095 443 aaKnown RBP9.67□□□□□ -0.86
CAPN3-204ENST00000356316 C3orf14Q9HBI5 128 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 RRAGDQ9NQL2 400 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-204ENST00000356316 SIRT5Q9NXA8 310 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 FBXL2Q9UKC9 423 aa9.67□□□□□ -0.86
CAPN3-204ENST00000356316 EIF3LQ9Y262 564 aaKnown RBP9.67□□□□□ -0.86
CAPN3-204ENST00000356316 RPH3AQ9Y2J0 694 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms