RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 NPSR1Q6W5P4 371 aa3.65□□□□□ -1.82
CNOT4-202ENST00000356162 ZNF551Q7Z340 670 aaPredicted RBP3.65□□□□□ -1.82
CNOT4-202ENST00000356162 ZNF227Q86WZ6 799 aa3.65□□□□□ -1.82
CNOT4-202ENST00000356162 MIER2Q8N344 545 aa3.65□□□□□ -1.82
CNOT4-202ENST00000356162 PSD4Q8NDX1 1056 aa3.65□□□□□ -1.82
CNOT4-202ENST00000356162 NUP43Q8NFH3 380 aa3.65□□□□□ -1.82
CNOT4-202ENST00000356162 SPPL2AQ8TCT8 520 aa3.65□□□□□ -1.82
CNOT4-202ENST00000356162 PAQR8Q8TEZ7 354 aa3.65□□□□□ -1.82
CNOT4-202ENST00000356162 OMA1Q96E52 524 aa3.65□□□□□ -1.82
CNOT4-202ENST00000356162 SLC35A4Q96G79 324 aa3.65□□□□□ -1.82
CNOT4-202ENST00000356162 CCDC115Q96NT0 180 aa3.65□□□□□ -1.82
CNOT4-202ENST00000356162 OR52B2Q96RD2 323 aa3.65□□□□□ -1.82
CNOT4-202ENST00000356162 NXF5Q9H1B4 397 aaKnown RBP3.65□□□□□ -1.82
CNOT4-202ENST00000356162 SDR39U1Q9NRG7 319 aaPredicted RBP3.65□□□□□ -1.82
CNOT4-202ENST00000356162 SACM1LQ9NTJ5 587 aa3.65□□□□□ -1.82
CNOT4-202ENST00000356162 CNIH4Q9P003 139 aa3.65□□□□□ -1.82
CNOT4-202ENST00000356162 LUZP4Q9P127 313 aa3.65□□□□□ -1.82
CNOT4-202ENST00000356162 BTNL2Q9UIR0 455 aa3.65□□□□□ -1.82
CNOT4-202ENST00000356162 CNOT11Q9UKZ1 510 aaKnown RBP3.65□□□□□ -1.82
CNOT4-202ENST00000356162 GPR55Q9Y2T6 319 aaPredicted RBP3.65□□□□□ -1.82
CNOT4-202ENST00000356162 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 FAM234BA2RU67 622 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 KLRC4-KLRK1H3BQV0 150 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 UPK1AO00322 258 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 PEX1O43933 1283 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 ICMTO60725 284 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 ZNF354AO60765 605 aaPredicted RBP3.65□□□□□ -1.83
CNOT4-202ENST00000356162 SOX30O94993 753 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 P04436 131 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 EDN3P14138 238 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 FSTP19883 344 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 ABCD3P28288 659 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 LCN1P31025 176 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 SOAT1P35610 550 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 KRT20P35900 424 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 MDH1P40925 334 aaKnown RBP3.65□□□□□ -1.83
CNOT4-202ENST00000356162 MEOX1P50221 254 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 TLE1Q04724 770 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 PGS1Q32NB8 556 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 SPDYE7PQ495Y7 208 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 VPS26BQ4G0F5 336 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 CYP27C1Q4G0S4 372 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 PRR30Q53SZ7 412 aaPredicted RBP3.65□□□□□ -1.83
CNOT4-202ENST00000356162 SPANXN4Q5MJ08 99 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 OR4F3Q6IEY1 312 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 MFSD12Q6NUT3 480 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 CDC73Q6P1J9 531 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 BHLHB9Q6PI77 547 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 IL20RBQ6UXL0 311 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 BNC2Q6ZN30 1099 aaPredicted RBP3.65□□□□□ -1.83
CNOT4-202ENST00000356162 C16orf47Q6ZP98 133 aaPredicted RBP3.65□□□□□ -1.83
CNOT4-202ENST00000356162 GK5Q6ZS86 529 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 GALNTL5Q7Z4T8 443 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 ZNF605Q86T29 641 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 SLC44A2Q8IWA5 706 aaPredicted RBP3.65□□□□□ -1.83
CNOT4-202ENST00000356162 CDRT4Q8N9R6 151 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 VPS37AQ8NEZ2 397 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 OR4A15Q8NGL6 344 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 UBASH3BQ8TF42 649 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 RNF138Q8WVD3 245 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 NR4A3Q92570 626 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 HGDQ93099 445 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 FAM120BQ96EK7 910 aaKnown RBP3.65□□□□□ -1.83
CNOT4-202ENST00000356162 DTNBP1Q96EV8 351 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 GIMAP5Q96F15 307 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 SLC35G5Q96KT7 338 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 MARK4Q96L34 752 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 ZNF597Q96LX8 424 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 FRMD6Q96NE9 622 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 STACQ99469 402 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 BARD1Q99728 777 aaKnown RBP3.65□□□□□ -1.83
CNOT4-202ENST00000356162 FAM173AQ9BQD7 235 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 HES7Q9BYE0 225 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 CXorf36Q9H7Y0 433 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 LIN28AQ9H9Z2 209 aaKnown RBP3.65□□□□□ -1.83
CNOT4-202ENST00000356162 Q9N2J8 555 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 NPHS2Q9NP85 383 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 AGPAT4Q9NRZ5 378 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 ZCCHC3Q9NUD5 404 aaKnown RBP3.65□□□□□ -1.83
CNOT4-202ENST00000356162 MRGBPQ9NV56 204 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 GIN1Q9NXP7 522 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 ANKRD10Q9NXR5 420 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 MRTO4Q9UKD2 239 aaKnown RBP3.65□□□□□ -1.83
CNOT4-202ENST00000356162 BOKQ9UMX3 212 aaPredicted RBP3.65□□□□□ -1.83
CNOT4-202ENST00000356162 NPFFR2Q9Y5X5 522 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 COPG1Q9Y678 874 aaKnown RBP3.65□□□□□ -1.83
CNOT4-202ENST00000356162 CHCHD2Q9Y6H1 151 aaPredicted RBP3.65□□□□□ -1.83
CNOT4-202ENST00000356162 ASPMQ8IZT6 3477 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 SHANK1Q9Y566 2161 aa3.65□□□□□ -1.83
CNOT4-202ENST00000356162 RNF103-CHMP3A0A140T963 221 aa3.64□□□□□ -1.83
CNOT4-202ENST00000356162 PRSS51A0A1B0GVH4 220 aa3.64□□□□□ -1.83
CNOT4-202ENST00000356162 PRAMEF25A6NGN4 478 aa3.64□□□□□ -1.83
CNOT4-202ENST00000356162 OR6C70A6NIJ9 312 aa3.64□□□□□ -1.83
CNOT4-202ENST00000356162 J3QKU1 62 aa3.64□□□□□ -1.83
CNOT4-202ENST00000356162 ACOT7O00154 380 aa3.64□□□□□ -1.83
CNOT4-202ENST00000356162 CFLARO15519 480 aa3.64□□□□□ -1.83
CNOT4-202ENST00000356162 TSPAN2O60636 221 aa3.64□□□□□ -1.83
CNOT4-202ENST00000356162 SCN2BO60939 215 aa3.64□□□□□ -1.83
CNOT4-202ENST00000356162 SLC22A3O75751 556 aa3.64□□□□□ -1.83
CNOT4-202ENST00000356162 NKX2-2O95096 273 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms