RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 ZNF468Q5VIY5 522 aaPredicted RBP14.33□□□□□ -0.12
TRIM13-201ENST00000356017 LYPD8Q6UX82 237 aa14.33□□□□□ -0.12
TRIM13-201ENST00000356017 FITM2Q8N6M3 262 aa14.33□□□□□ -0.12
TRIM13-201ENST00000356017 POU5F2Q8N7G0 328 aa14.33□□□□□ -0.12
TRIM13-201ENST00000356017 OR52N2Q8NGI0 321 aa14.33□□□□□ -0.12
TRIM13-201ENST00000356017 FBXO30Q8TB52 745 aa14.33□□□□□ -0.12
TRIM13-201ENST00000356017 TMBIM1Q969X1 311 aa14.33□□□□□ -0.12
TRIM13-201ENST00000356017 ROPN1LQ96C74 230 aa14.33□□□□□ -0.12
TRIM13-201ENST00000356017 SLC35A4Q96G79 324 aa14.33□□□□□ -0.12
TRIM13-201ENST00000356017 OR7D2Q96RA2 312 aa14.33□□□□□ -0.12
TRIM13-201ENST00000356017 CGREF1Q99674 301 aa14.33□□□□□ -0.12
TRIM13-201ENST00000356017 SH3GL1Q99961 368 aa14.33□□□□□ -0.12
TRIM13-201ENST00000356017 G6PC3Q9BUM1 346 aa14.33□□□□□ -0.12
TRIM13-201ENST00000356017 BTBD2Q9BX70 525 aa14.33□□□□□ -0.12
TRIM13-201ENST00000356017 OR51I1Q9H343 314 aa14.33□□□□□ -0.12
TRIM13-201ENST00000356017 TRBV5-3A0A0A0MS03 114 aa14.32□□□□□ -0.12
TRIM13-201ENST00000356017 OR6C70A6NIJ9 312 aa14.32□□□□□ -0.12
TRIM13-201ENST00000356017 ATXN7O15265 892 aaPredicted RBP14.32□□□□□ -0.12
TRIM13-201ENST00000356017 NEURL1O76050 574 aa14.32□□□□□ -0.12
TRIM13-201ENST00000356017 F10P00742 488 aa14.32□□□□□ -0.12
TRIM13-201ENST00000356017 CD46P15529 392 aa14.32□□□□□ -0.12
TRIM13-201ENST00000356017 CRATP43155 626 aa14.32□□□□□ -0.12
TRIM13-201ENST00000356017 EFR3AQ14156 821 aa14.32□□□□□ -0.12
TRIM13-201ENST00000356017 SPINK14Q6IE38 97 aa14.32□□□□□ -0.12
TRIM13-201ENST00000356017 TNFAIP8L2Q6P589 184 aaPredicted RBP14.32□□□□□ -0.12
TRIM13-201ENST00000356017 Q6ZS92 163 aa14.32□□□□□ -0.12
TRIM13-201ENST00000356017 NUP54Q7Z3B4 507 aa14.32□□□□□ -0.12
TRIM13-201ENST00000356017 MSRB3Q8IXL7 192 aa14.32□□□□□ -0.12
TRIM13-201ENST00000356017 PRR22Q8IZ63 422 aa14.32□□□□□ -0.12
TRIM13-201ENST00000356017 BCORP1Q8N888 145 aa14.32□□□□□ -0.12
TRIM13-201ENST00000356017 OR4N2Q8NGD1 307 aa14.32□□□□□ -0.12
TRIM13-201ENST00000356017 OR5D16Q8NGK9 328 aa14.32□□□□□ -0.12
TRIM13-201ENST00000356017 PIK3R3Q92569 461 aa14.32□□□□□ -0.12
TRIM13-201ENST00000356017 DIO2Q92813 273 aa14.32□□□□□ -0.12
TRIM13-201ENST00000356017 CDS1Q92903 461 aa14.32□□□□□ -0.12
TRIM13-201ENST00000356017 LRRC58Q96CX6 371 aa14.32□□□□□ -0.12
TRIM13-201ENST00000356017 RMND5BQ96G75 393 aaPredicted RBP14.32□□□□□ -0.12
TRIM13-201ENST00000356017 AURKBQ96GD4 344 aaPredicted RBP14.32□□□□□ -0.12
TRIM13-201ENST00000356017 ANKRD27Q96NW4 1050 aa14.32□□□□□ -0.12
TRIM13-201ENST00000356017 COL21A1Q96P44 957 aa14.32□□□□□ -0.12
TRIM13-201ENST00000356017 SECISBP2Q96T21 854 aaKnown RBP14.32□□□□□ -0.12
TRIM13-201ENST00000356017 IL1RL2Q9HB29 575 aa14.32□□□□□ -0.12
TRIM13-201ENST00000356017 TIMMDC1Q9NPL8 285 aa14.32□□□□□ -0.12
TRIM13-201ENST00000356017 B3GNT3Q9Y2A9 372 aa14.32□□□□□ -0.12
TRIM13-201ENST00000356017 PCDHGB6Q9Y5F9 930 aa14.32□□□□□ -0.12
TRIM13-201ENST00000356017 AIM2O14862 343 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 HS6ST1O60243 411 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 SLC25A12O75746 678 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 KCNK2O95069 426 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 UNC5CO95185 931 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 IL33O95760 270 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 OR12D1P0DN82 309 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 LCN1P31025 176 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 MNAT1P51948 309 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 MVDP53602 400 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 ART3Q13508 389 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 LY6DQ14210 128 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 KRT72Q14CN4 511 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 RGNQ15493 299 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.31□□□□□ -0.12
TRIM13-201ENST00000356017 RUNDC3AQ59EK9 446 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.31□□□□□ -0.12
TRIM13-201ENST00000356017 SLC22A10Q63ZE4 541 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 PCSK4Q6UW60 755 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 RBMXL3Q8N7X1 1067 aaKnown RBP14.31□□□□□ -0.12
TRIM13-201ENST00000356017 TMEM178AQ8NBL3 297 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 MDS2Q8NDY4 140 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 FAM13CQ8NE31 585 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 CATSPER1Q8NEC5 780 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 PNPT1Q8TCS8 783 aaKnown RBP14.31□□□□□ -0.12
TRIM13-201ENST00000356017 XAGE5Q8WWM1 108 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 RCN3Q96D15 328 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 TMCO6Q96DC7 493 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 C5orf34Q96MH7 638 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 SIGLEC12Q96PQ1 595 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 ADOQ96SZ5 270 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 SERHL2Q9H4I8 314 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 CNIH4Q9P003 139 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 TAGLN3Q9UI15 199 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 LIPT1Q9Y234 373 aa14.31□□□□□ -0.12
TRIM13-201ENST00000356017 GXYLT2A0PJZ3 443 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 HMGN4O00479 90 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 TSPAN2O60636 221 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 GPX2P18283 190 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 CD97P48960 835 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 ST13P50502 369 aaKnown RBP14.3□□□□□ -0.12
TRIM13-201ENST00000356017 CASP9P55211 416 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 FBXW4P57775 412 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 ZNF169Q14929 603 aaPredicted RBP14.3□□□□□ -0.12
TRIM13-201ENST00000356017 SLC25A25Q6KCM7 469 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 C16orf62Q7Z3J2 963 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 TEX19Q8NA77 164 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 PSD4Q8NDX1 1056 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 CHDHQ8NE62 594 aaPredicted RBP14.3□□□□□ -0.12
TRIM13-201ENST00000356017 FAM110BQ8TC76 370 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 PAQR8Q8TEZ7 354 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 OTUB1Q96FW1 271 aaPredicted RBP14.3□□□□□ -0.12
TRIM13-201ENST00000356017 THUMPD3Q9BV44 507 aaKnown RBP14.3□□□□□ -0.12
TRIM13-201ENST00000356017 CACNA1BQ00975 2339 aa14.3□□□□□ -0.12
TRIM13-201ENST00000356017 CPAMD8Q8IZJ3 1885 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms