RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 KCNAB1Q14722 419 aa14.83□□□□□ -0.03
RTN3-205ENST00000356000 TMEM132DQ14C87 1099 aa14.83□□□□□ -0.03
RTN3-205ENST00000356000 TRIM46Q7Z4K8 759 aa14.83□□□□□ -0.03
RTN3-205ENST00000356000 BCDIN3DQ7Z5W3 292 aaKnown RBP14.83□□□□□ -0.03
RTN3-205ENST00000356000 TMEM185AQ8NFB2 350 aa14.83□□□□□ -0.03
RTN3-205ENST00000356000 STK35Q8TDR2 534 aa14.83□□□□□ -0.03
RTN3-205ENST00000356000 GATAD2BQ8WXI9 593 aa14.83□□□□□ -0.03
RTN3-205ENST00000356000 WDR89Q96FK6 387 aaPredicted RBP14.83□□□□□ -0.03
RTN3-205ENST00000356000 ART5Q96L15 291 aa14.83□□□□□ -0.03
RTN3-205ENST00000356000 LURAP1Q96LR2 239 aa14.83□□□□□ -0.03
RTN3-205ENST00000356000 EDEM2Q9BV94 578 aa14.83□□□□□ -0.03
RTN3-205ENST00000356000 HMX1Q9NP08 348 aaPredicted RBP14.83□□□□□ -0.03
RTN3-205ENST00000356000 ACER3Q9NUN7 267 aa14.83□□□□□ -0.03
RTN3-205ENST00000356000 OR12D3Q9UGF7 316 aa14.83□□□□□ -0.03
RTN3-205ENST00000356000 PPT2Q9UMR5 302 aa14.83□□□□□ -0.03
RTN3-205ENST00000356000 PLEKHA6Q9Y2H5 1048 aa14.83□□□□□ -0.03
RTN3-205ENST00000356000 PIAS3Q9Y6X2 628 aa14.83□□□□□ -0.03
RTN3-205ENST00000356000 PPM1DO15297 605 aa14.83□□□□□ -0.04
RTN3-205ENST00000356000 CD3GP09693 182 aa14.83□□□□□ -0.04
RTN3-205ENST00000356000 C1SP09871 688 aa14.83□□□□□ -0.04
RTN3-205ENST00000356000 ANKRD34CP0C6C1 535 aa14.83□□□□□ -0.04
RTN3-205ENST00000356000 PRG2P13727 222 aa14.83□□□□□ -0.04
RTN3-205ENST00000356000 TNFRSF1BP20333 461 aa14.83□□□□□ -0.04
RTN3-205ENST00000356000 AKAP5P24588 427 aa14.83□□□□□ -0.04
RTN3-205ENST00000356000 MAPK3P27361 379 aaPredicted RBP14.83□□□□□ -0.04
RTN3-205ENST00000356000 PSMA6P60900 246 aaKnown RBP14.83□□□□□ -0.04
RTN3-205ENST00000356000 GTF2H2Q13888 395 aa14.83□□□□□ -0.04
RTN3-205ENST00000356000 MBTPS1Q14703 1052 aa14.83□□□□□ -0.04
RTN3-205ENST00000356000 TMEM132BQ14DG7 1078 aa14.83□□□□□ -0.04
RTN3-205ENST00000356000 IDNKQ5T6J7 187 aa14.83□□□□□ -0.04
RTN3-205ENST00000356000 C12orf73Q69YU5 71 aa14.83□□□□□ -0.04
RTN3-205ENST00000356000 GTF2H2CQ6P1K8 395 aa14.83□□□□□ -0.04
RTN3-205ENST00000356000 B3GLCTQ6Y288 498 aa14.83□□□□□ -0.04
RTN3-205ENST00000356000 MSANTD1Q6ZTZ1 278 aa14.83□□□□□ -0.04
RTN3-205ENST00000356000 ARHGAP12Q8IWW6 846 aa14.83□□□□□ -0.04
RTN3-205ENST00000356000 CPXM2Q8N436 756 aa14.83□□□□□ -0.04
RTN3-205ENST00000356000 HDDC3Q8N4P3 179 aa14.83□□□□□ -0.04
RTN3-205ENST00000356000 OR8J1Q8NGP2 316 aa14.83□□□□□ -0.04
RTN3-205ENST00000356000 NELL1Q92832 810 aa14.83□□□□□ -0.04
RTN3-205ENST00000356000 IFT27Q9BW83 186 aa14.83□□□□□ -0.04
RTN3-205ENST00000356000 FZD8Q9H461 694 aa14.83□□□□□ -0.04
RTN3-205ENST00000356000 TNFSF13BQ9Y275 285 aa14.83□□□□□ -0.04
RTN3-205ENST00000356000 A0A1B0GVC2 190 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 ARRDC5A6NEK1 342 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 A6NIN4 97 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 COLCA2A8K830 154 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 C1orf196B1AJZ1 125 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 GABRPO00591 440 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 SMAD6O43541 496 aaKnown RBP14.82□□□□□ -0.04
RTN3-205ENST00000356000 LDB2O43679 373 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 MT-ND4P03905 459 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 GJB1P08034 283 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 MPGP29372 298 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 FEN1P39748 380 aaKnown RBP14.82□□□□□ -0.04
RTN3-205ENST00000356000 STC1P52823 247 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 E2F1Q01094 437 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 TAP2Q03519 686 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 DUOXA1Q1HG43 343 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 GPRC6AQ5T6X5 926 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 RGL4Q8IZJ4 473 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 ARRDC1Q8N5I2 433 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 FATE1Q969F0 183 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 SSX3Q99909 188 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 COLEC11Q9BWP8 271 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 CHMP1AQ9HD42 196 aaPredicted RBP14.82□□□□□ -0.04
RTN3-205ENST00000356000 THSD1Q9NS62 852 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 ZSCAN32Q9NX65 697 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 A0A0G2JLL6 359 aaPredicted RBP14.82□□□□□ -0.04
RTN3-205ENST00000356000 HLA-DPB1P04440 258 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 CTNNB1P35222 781 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 SLC1A3P43003 542 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 DGKEP52429 567 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 UBE2IP63279 158 aaKnown RBP14.82□□□□□ -0.04
RTN3-205ENST00000356000 SNTB2Q13425 540 aaKnown RBP14.82□□□□□ -0.04
RTN3-205ENST00000356000 SLC10A6Q3KNW5 377 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 PRRT2Q7Z6L0 340 aaPredicted RBP14.82□□□□□ -0.04
RTN3-205ENST00000356000 OR11G2Q8NGC1 345 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 OR6B3Q8NGW1 331 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 GPR21Q99679 349 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 EGLN1Q9GZT9 426 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 SLC38A1Q9H2H9 487 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 IPPKQ9H8X2 491 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 NANSQ9NR45 359 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 NKIRAS2Q9NYR9 191 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 FLVCR2Q9UPI3 526 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 LOC285556D6RIA3 1793 aa14.82□□□□□ -0.04
RTN3-205ENST00000356000 LRIT2A6NDA9 550 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 C5orf58C9J3I9 102 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 HCRTO43612 131 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 GCM2O75603 506 aaPredicted RBP14.81□□□□□ -0.04
RTN3-205ENST00000356000 WNT1P04628 370 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 IFNGR1P15260 489 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 ZNF44P15621 663 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 GKP32189 559 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 DYRK1AQ13627 763 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 HEPACAMQ14CZ8 416 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 IFI44LQ53G44 452 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 HBMQ6B0K9 141 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 HFE2Q6ZVN8 426 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 NR2C2APQ86WQ0 139 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms