RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 CD274Q9NZQ7 290 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 CPNE7Q9UBL6 633 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 C1QTNF9BB2RNN3 333 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 KPNA4O00629 521 aaPredicted RBP5.21□□□□□ -1.58
CD47-201ENST00000355354 MRPL3P09001 348 aaKnown RBP5.21□□□□□ -1.58
CD47-201ENST00000355354 C1QTNF9P0C862 333 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 OCM2P0CE71 109 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 OCMP0CE72 109 aaPredicted RBP5.21□□□□□ -1.58
CD47-201ENST00000355354 TNNI3P19429 210 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 CASP3P42574 277 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 TNFRSF4P43489 277 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 SELENOPP49908 381 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 C2orf80Q0P641 193 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 SERTAD2Q14140 314 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 CRY1Q16526 586 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 GLYR1Q49A26 553 aaPredicted RBP5.21□□□□□ -1.58
CD47-201ENST00000355354 FAHD1Q6P587 224 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 SLCO4C1Q6ZQN7 724 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 PRICKLE2Q7Z3G6 844 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 CCDC116Q8IYX3 515 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 RPLP0P6Q8NHW5 317 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 UTP15Q8TED0 518 aaKnown RBP5.21□□□□□ -1.58
CD47-201ENST00000355354 STARD8Q92502 1023 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 C6orf62Q9GZU0 229 aaPredicted RBP5.21□□□□□ -1.58
CD47-201ENST00000355354 HINT3Q9NQE9 182 aaKnown RBP5.21□□□□□ -1.58
CD47-201ENST00000355354 NDUFA13Q9P0J0 144 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 COPS3Q9UNS2 423 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 AP3M1Q9Y2T2 418 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 IGHV1OR15-9A0A0B4J2B8 117 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 NEDD8-MDP1E9PL57 170 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 MANBAO00462 879 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 HMGN4O00479 90 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 ABCB7O75027 752 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 REM1O75628 298 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 MPZL1O95297 269 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 CD3GP09693 182 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 CEACAM1P13688 526 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 ADH6P28332 368 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 SHC1P29353 583 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 NTF4P34130 210 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 GPR4P46093 362 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 C21orf59P57076 290 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 PPP2CBP62714 309 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 PPP2CAP67775 309 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 VMACQ2NL98 169 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 OR5M10Q6IEU7 315 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 SEZ6L2Q6UXD5 910 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 DPP10Q8N608 796 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 TMEM99Q8N816 258 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 MORN4Q8NDC4 146 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 SLC26A10Q8NG04 563 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 PFN4Q8NHR9 129 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 TMEM255BQ8WV15 326 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 PMEPA1Q969W9 287 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 SHDQ96IW2 340 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 TNIP3Q96KP6 325 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 DNAH3Q8TD57 4116 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 TBC1D3DA0A087WVF3 549 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 TBC1D3IA0A087WXS9 549 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 TBC1D3EA0A087X179 549 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 TBC1D3KA0A087X1G2 549 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 SMIM31A0A1B0GVY4 71 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 TBC1D3BA6NDS4 549 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 TBC1D3FA6NER0 549 aaPredicted RBP5.2□□□□□ -1.58
CD47-201ENST00000355354 TBC1D3LB9A6J9 549 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 CDK2AP1O14519 115 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 PRICKLE3O43900 615 aaPredicted RBP5.2□□□□□ -1.58
CD47-201ENST00000355354 CSO75390 466 aaKnown RBP5.2□□□□□ -1.58
CD47-201ENST00000355354 TBC1D3HP0C7X1 549 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 RHOQP17081 205 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 FNTBP49356 437 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 ZNF136P52737 540 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 COPZ1P61923 177 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 ZNF91Q05481 1191 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 HSPB3Q12988 150 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 ZDHHC20Q5W0Z9 365 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 TBC1D3GQ6DHY5 549 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 TBC1D3CQ6IPX1 549 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 TBC1D3Q8IZP1 549 aaPredicted RBP5.2□□□□□ -1.58
CD47-201ENST00000355354 BATF2Q8N1L9 274 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.2□□□□□ -1.58
CD47-201ENST00000355354 APCDD1LQ8NCL9 501 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 SKA2Q8WVK7 121 aaPredicted RBP5.2□□□□□ -1.58
CD47-201ENST00000355354 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.2□□□□□ -1.58
CD47-201ENST00000355354 ARRDC3Q96B67 414 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 SPACA5Q96QH8 159 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 PANX1Q96RD7 426 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 SLC12A9Q9BXP2 914 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 ARL15Q9NXU5 204 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 PLEKHA6Q9Y2H5 1048 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 CD8B2A6NJW9 211 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 WASH4PA8MWX3 477 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 ISM1B1AKI9 464 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 ZW10O43264 779 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 RAMP1O60894 148 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 ATP5HO75947 161 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 IL3P08700 152 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 CD8BP10966 210 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 IL7P13232 177 aa5.2□□□□□ -1.58
CD47-201ENST00000355354 TIMP2P16035 220 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms