RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 FOLR1P15328 257 aa16.02■□□□□ 0.15
VPS13B-201ENST00000355155 HPCAP84074 193 aa16.02■□□□□ 0.15
VPS13B-201ENST00000355155 ID2Q02363 134 aa16.02■□□□□ 0.15
VPS13B-201ENST00000355155 COX10Q12887 443 aa16.02■□□□□ 0.15
VPS13B-201ENST00000355155 MAD2L1BPQ15013 274 aaPredicted RBP16.02■□□□□ 0.15
VPS13B-201ENST00000355155 ZNF574Q6ZN55 896 aaPredicted RBP16.02■□□□□ 0.15
VPS13B-201ENST00000355155 PEX5LQ8IYB4 626 aa16.02■□□□□ 0.15
VPS13B-201ENST00000355155 OR52R1Q8NGF1 315 aa16.02■□□□□ 0.15
VPS13B-201ENST00000355155 RIT1Q92963 219 aa16.02■□□□□ 0.15
VPS13B-201ENST00000355155 DGAT2Q96PD7 388 aa16.02■□□□□ 0.15
VPS13B-201ENST00000355155 RLIMQ9NVW2 624 aa16.02■□□□□ 0.15
VPS13B-201ENST00000355155 BLOC1S6Q9UL45 172 aa16.02■□□□□ 0.15
VPS13B-201ENST00000355155 SLC6A14Q9UN76 642 aa16.02■□□□□ 0.15
VPS13B-201ENST00000355155 IGLV3-12A0A075B6K2 115 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 TRBV4-1A0A0J9YWV2 114 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 NPIPB9F8W1W9 429 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 PRAMEF2O60811 474 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 OR5F1O95221 314 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 CKMT1AP12532 417 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 GABRB1P18505 474 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 RPP38P78345 283 aaKnown RBP16.01■□□□□ 0.15
VPS13B-201ENST00000355155 POU6F2P78424 691 aaPredicted RBP16.01■□□□□ 0.15
VPS13B-201ENST00000355155 PSG6Q00889 435 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 ILKQ13418 452 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 NADK2Q4G0N4 442 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 CYP27C1Q4G0S4 372 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 DCST1Q5T197 706 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 DBX2Q6ZNG2 339 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 RBM45Q8IUH3 476 aaKnown RBP16.01■□□□□ 0.15
VPS13B-201ENST00000355155 LOXL4Q96JB6 756 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 SIGLEC11Q96RL6 698 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 NIPSNAP1Q9BPW8 284 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 SERTAD3Q9UJW9 196 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 SRPK3Q9UPE1 567 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 PCDHGB2Q9Y5G2 931 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 GMPPBQ9Y5P6 360 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 ZAR1LA6NP61 321 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 SIGLEC6O43699 453 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 FCMRO60667 390 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 NID1P14543 1247 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 RHAGQ02094 409 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 PERM1Q5SV97 790 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 C1orf94Q6P1W5 598 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 VRK2Q86Y07 508 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 RIBC2Q9H4K1 309 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 DUSP21Q9H596 190 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 FANCEQ9HB96 536 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 TMCC3Q9ULS5 477 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 ZNF232Q9UNY5 417 aa16.01■□□□□ 0.15
VPS13B-201ENST00000355155 ZNF701M0R085 212 aaPredicted RBP16■□□□□ 0.15
VPS13B-201ENST00000355155 M0R3H8 397 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 SLC1A7O00341 560 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 OR10H2O60403 315 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 CYC1P08574 325 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 ELK4P28324 431 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 TTKP33981 857 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 ACY1Q03154 408 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 LARS2Q15031 903 aaKnown RBP16■□□□□ 0.15
VPS13B-201ENST00000355155 SEC23BQ15437 767 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 ZNF141Q15928 474 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 PGBD2Q6P3X8 592 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 ZNF836Q6ZNA1 936 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 GALNT5Q7Z7M9 940 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 BPHLQ86WA6 291 aaPredicted RBP16■□□□□ 0.15
VPS13B-201ENST00000355155 ZSCAN1Q8NBB4 408 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 ING2Q9H160 280 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 NECTIN3Q9NQS3 549 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 KLHL28Q9NXS3 571 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 PRUNE2Q8WUY3 3088 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 CACNA1EQ15878 2313 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 A0A1B0GX78 115 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 ABCB7O75027 752 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 GASTP01350 101 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 LCN1P31025 176 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 MAT1AQ00266 395 aaKnown RBP16■□□□□ 0.15
VPS13B-201ENST00000355155 STX4Q12846 297 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 SLC13A2Q13183 592 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 KCNAB1Q14722 419 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 CPEB4Q17RY0 729 aaKnown RBP eCLIP16■□□□□ 0.15
VPS13B-201ENST00000355155 ENTPD8Q5MY95 495 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 RHBDD2Q6NTF9 364 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 SATL1Q86VE3 508 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 SLC9A6Q92581 669 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 PIGKQ92643 395 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 ZG16BQ96DA0 208 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 DGCR14Q96DF8 476 aaKnown RBP16■□□□□ 0.15
VPS13B-201ENST00000355155 OTUB1Q96FW1 271 aaPredicted RBP16■□□□□ 0.15
VPS13B-201ENST00000355155 NUDT22Q9BRQ3 303 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 LRRN3Q9H3W5 708 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 ZNF556Q9HAH1 456 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 ADAP2Q9NPF8 381 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 FKBP14Q9NWM8 211 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 SIDT1Q9NXL6 827 aaKnown RBP16■□□□□ 0.15
VPS13B-201ENST00000355155 KMT2EQ8IZD2 1858 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 A0A1W2PQM1 296 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 TPST2O60704 377 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 UGT2B17O75795 530 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 KCNK2O95069 426 aa16■□□□□ 0.15
VPS13B-201ENST00000355155 TP53P04637 393 aaPredicted RBP16■□□□□ 0.15
VPS13B-201ENST00000355155 FUT4P22083 530 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms