RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 TCEAL4Q96EI5 215 aa12.52□□□□□ -0.41
SCN8A-202ENST00000355133 MAP3K3Q99759 626 aa12.52□□□□□ -0.41
SCN8A-202ENST00000355133 KLF16Q9BXK1 252 aaPredicted RBP12.52□□□□□ -0.41
SCN8A-202ENST00000355133 MYNNQ9NPC7 610 aa12.52□□□□□ -0.41
SCN8A-202ENST00000355133 PDLIM7Q9NR12 457 aa12.52□□□□□ -0.41
SCN8A-202ENST00000355133 UBE2J1Q9Y385 318 aaPredicted RBP12.52□□□□□ -0.41
SCN8A-202ENST00000355133 PHYHO14832 338 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 IFNA5P01569 189 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 ITGB7P26010 798 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 MAGEA3P43357 314 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 MAP2K3P46734 347 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 PITPNBP48739 271 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 PRAMEF8Q5VWM4 474 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 PRAMEF7Q5VXH5 474 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 ARHGAP12Q8IWW6 846 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 RCBTB1Q8NDN9 531 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 OR7G3Q8NG95 312 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 OR9Q2Q8NGE9 314 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 CDCA3Q99618 268 aaPredicted RBP12.51□□□□□ -0.41
SCN8A-202ENST00000355133 CDH20Q9HBT6 801 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 SMOXQ9NWM0 555 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 ERVK13-1Q9NX77 482 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 IL17CQ9P0M4 197 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 MYH2Q9UKX2 1941 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 FAM208AQ9UK61 1670 aaKnown RBP12.51□□□□□ -0.41
SCN8A-202ENST00000355133 A0A0J9YY10 115 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 AGAP5A6NIR3 686 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 GJE1A6NN92 205 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 F5H0A9 414 aaPredicted RBP12.51□□□□□ -0.41
SCN8A-202ENST00000355133 FOXD2O60548 495 aaPredicted RBP12.51□□□□□ -0.41
SCN8A-202ENST00000355133 ATP6V1G1O75348 118 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 FOXA1P55317 472 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 PDZD3Q86UT5 571 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 KCNIP1Q9NZI2 227 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 CXXC1Q9P0U4 656 aaPredicted RBP12.51□□□□□ -0.41
SCN8A-202ENST00000355133 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.51□□□□□ -0.41
SCN8A-202ENST00000355133 FRS3O43559 492 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 LDB3O75112 727 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 ART1P52961 327 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 OR5AK2Q8NH90 309 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 FRS2Q8WU20 508 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 NEIL2Q969S2 332 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 SFXN2Q96NB2 322 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 DMRT3Q9NQL9 472 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 MGAT4CQ9UBM8 478 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 A0A0A6YYH2 397 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 OTOL1A6NHN0 477 aaPredicted RBP12.51□□□□□ -0.41
SCN8A-202ENST00000355133 A6NJ64 397 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 SLC6A11P48066 632 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 SOX9P48436 509 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 PIN1Q13526 163 aaPredicted RBP12.51□□□□□ -0.41
SCN8A-202ENST00000355133 HES5Q5TA89 166 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 DPPA4Q7L190 304 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 OR6C4Q8NGE1 309 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 POTEKPQ9BYX7 375 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 NELFAQ9H3P2 528 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 NMNAT1Q9HAN9 279 aaPredicted RBP12.51□□□□□ -0.41
SCN8A-202ENST00000355133 PTRH2Q9Y3E5 179 aaKnown RBP12.51□□□□□ -0.41
SCN8A-202ENST00000355133 ADAM18Q9Y3Q7 739 aa12.51□□□□□ -0.41
SCN8A-202ENST00000355133 ADAP00813 363 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 EIF2B1Q14232 305 aaKnown RBP12.5□□□□□ -0.41
SCN8A-202ENST00000355133 NR0B2Q15466 257 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 PARS2Q7L3T8 475 aaKnown RBP12.5□□□□□ -0.41
SCN8A-202ENST00000355133 MEX3DQ86XN8 651 aaKnown RBP12.5□□□□□ -0.41
SCN8A-202ENST00000355133 CYB561A3Q8NBI2 242 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 C3orf58Q8NDZ4 430 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 OR52E1Q8NGJ3 308 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 OR5D16Q8NGK9 328 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 RLN3Q8WXF3 142 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 ACAD8Q9UKU7 415 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 MAB21L2Q9Y586 359 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 EEF1E1-BLOC1S5C9J1V9 151 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 SLC1A7O00341 560 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 NME4O00746 187 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 SNNO75324 88 aaPredicted RBP12.5□□□□□ -0.41
SCN8A-202ENST00000355133 HTR3BO95264 441 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 CD79AP11912 226 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 ZNF28P17035 718 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 GJA5P36382 358 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 EMP2P54851 167 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 SERTAD2Q14140 314 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 IRF4Q15306 451 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 SFRP4Q6FHJ7 346 aaPredicted RBP12.5□□□□□ -0.41
SCN8A-202ENST00000355133 METTL2AQ96IZ6 378 aaKnown RBP12.5□□□□□ -0.41
SCN8A-202ENST00000355133 MYRFLQ96LU7 910 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 HIF3AQ9Y2N7 669 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 SLC9B1P1A6NJY1 282 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 SYT7O43581 403 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 CLDN10P78369 228 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 COL28A1Q2UY09 1125 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 HNRNPA1L2Q32P51 320 aaKnown RBP12.5□□□□□ -0.41
SCN8A-202ENST00000355133 KDELC1Q6UW63 502 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 CFAP77Q6ZQR2 320 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 ZNF619Q8N2I2 560 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 FGF13Q92913 245 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 GDE1Q9NZC3 331 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 ENPP4Q9Y6X5 453 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 DNAJC25-GNG10A0A024R161 153 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 FBP2O00757 339 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 JRKO75564 520 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms