RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 RIPK2O43353 540 aa14.37□□□□□ -0.11
PDGFA-201ENST00000354513 PCDH7O60245 1069 aa14.37□□□□□ -0.11
PDGFA-201ENST00000354513 DLX3O60479 287 aa14.37□□□□□ -0.11
PDGFA-201ENST00000354513 ERN1O75460 977 aaKnown RBP14.37□□□□□ -0.11
PDGFA-201ENST00000354513 HSD3B1P14060 373 aa14.37□□□□□ -0.11
PDGFA-201ENST00000354513 HSD3B2P26439 372 aa14.37□□□□□ -0.11
PDGFA-201ENST00000354513 HOXC12P31275 282 aa14.37□□□□□ -0.11
PDGFA-201ENST00000354513 CLDN15P56746 228 aa14.37□□□□□ -0.11
PDGFA-201ENST00000354513 OR5M10Q6IEU7 315 aa14.37□□□□□ -0.11
PDGFA-201ENST00000354513 OR7G2Q8NG99 324 aa14.37□□□□□ -0.11
PDGFA-201ENST00000354513 C16orf78Q8WTQ4 265 aa14.37□□□□□ -0.11
PDGFA-201ENST00000354513 WNT2BQ93097 391 aa14.37□□□□□ -0.11
PDGFA-201ENST00000354513 EXOSC8Q96B26 276 aaKnown RBP14.37□□□□□ -0.11
PDGFA-201ENST00000354513 ZFP3Q96NJ6 502 aa14.37□□□□□ -0.11
PDGFA-201ENST00000354513 KCNA7Q96RP8 456 aa14.37□□□□□ -0.11
PDGFA-201ENST00000354513 TM9SF2Q99805 663 aa14.37□□□□□ -0.11
PDGFA-201ENST00000354513 SMR3AQ99954 134 aa14.37□□□□□ -0.11
PDGFA-201ENST00000354513 FAIM2Q9BWQ8 316 aa14.37□□□□□ -0.11
PDGFA-201ENST00000354513 RTN4RQ9BZR6 473 aa14.37□□□□□ -0.11
PDGFA-201ENST00000354513 FLRT3Q9NZU0 649 aa14.37□□□□□ -0.11
PDGFA-201ENST00000354513 TESMINQ9Y4I5 508 aa14.37□□□□□ -0.11
PDGFA-201ENST00000354513 ZNF780BQ9Y6R6 833 aa14.37□□□□□ -0.11
PDGFA-201ENST00000354513 SH3D21A4FU49 640 aa14.36□□□□□ -0.11
PDGFA-201ENST00000354513 CCDC151A5D8V7 595 aa14.36□□□□□ -0.11
PDGFA-201ENST00000354513 REM1O75628 298 aa14.36□□□□□ -0.11
PDGFA-201ENST00000354513 GOSR1O95249 250 aa14.36□□□□□ -0.11
PDGFA-201ENST00000354513 ABHD2P08910 425 aa14.36□□□□□ -0.11
PDGFA-201ENST00000354513 TCEA1P23193 301 aaKnown RBP14.36□□□□□ -0.11
PDGFA-201ENST00000354513 GRK2P25098 689 aa14.36□□□□□ -0.11
PDGFA-201ENST00000354513 TIA1P31483 386 aaKnown RBP eCLIP14.36□□□□□ -0.11
PDGFA-201ENST00000354513 CCKARP32238 428 aa14.36□□□□□ -0.11
PDGFA-201ENST00000354513 PSG6Q00889 435 aa14.36□□□□□ -0.11
PDGFA-201ENST00000354513 RASA2Q15283 850 aa14.36□□□□□ -0.11
PDGFA-201ENST00000354513 ENPP6Q6UWR7 440 aa14.36□□□□□ -0.11
PDGFA-201ENST00000354513 TAOK1Q7L7X3 1001 aa14.36□□□□□ -0.11
PDGFA-201ENST00000354513 CXorf67Q86X51 503 aaPredicted RBP14.36□□□□□ -0.11
PDGFA-201ENST00000354513 FADS6Q8N9I5 356 aa14.36□□□□□ -0.11
PDGFA-201ENST00000354513 EBPLQ9BY08 206 aa14.36□□□□□ -0.11
PDGFA-201ENST00000354513 PSME2Q9UL46 239 aa14.36□□□□□ -0.11
PDGFA-201ENST00000354513 MRPS18CQ9Y3D5 142 aaKnown RBP14.36□□□□□ -0.11
PDGFA-201ENST00000354513 A0A1W2PNV4 684 aa14.35□□□□□ -0.11
PDGFA-201ENST00000354513 A8MXE2 369 aa14.35□□□□□ -0.11
PDGFA-201ENST00000354513 SUPT7LO94864 414 aa14.35□□□□□ -0.11
PDGFA-201ENST00000354513 ESRRBO95718 433 aa14.35□□□□□ -0.11
PDGFA-201ENST00000354513 DRD2P14416 443 aa14.35□□□□□ -0.11
PDGFA-201ENST00000354513 FOSL1P15407 271 aa14.35□□□□□ -0.11
PDGFA-201ENST00000354513 CHMP24386 653 aa14.35□□□□□ -0.11
PDGFA-201ENST00000354513 SLC29A2Q14542 456 aa14.35□□□□□ -0.11
PDGFA-201ENST00000354513 GALNT18Q6P9A2 607 aa14.35□□□□□ -0.11
PDGFA-201ENST00000354513 VWA1Q6PCB0 445 aa14.35□□□□□ -0.11
PDGFA-201ENST00000354513 TIFABQ6ZNK6 161 aa14.35□□□□□ -0.11
PDGFA-201ENST00000354513 GPRIN3Q6ZVF9 776 aa14.35□□□□□ -0.11
PDGFA-201ENST00000354513 EFHD2Q96C19 240 aaPredicted RBP14.35□□□□□ -0.11
PDGFA-201ENST00000354513 TMCO6Q96DC7 493 aa14.35□□□□□ -0.11
PDGFA-201ENST00000354513 ERP27Q96DN0 273 aa14.35□□□□□ -0.11
PDGFA-201ENST00000354513 SFXN2Q96NB2 322 aa14.35□□□□□ -0.11
PDGFA-201ENST00000354513 DACH2Q96NX9 599 aa14.35□□□□□ -0.11
PDGFA-201ENST00000354513 GSTO2Q9H4Y5 243 aa14.35□□□□□ -0.11
PDGFA-201ENST00000354513 TIMM22Q9Y584 194 aa14.35□□□□□ -0.11
PDGFA-201ENST00000354513 UQCRHLA0A096LP55 91 aa14.34□□□□□ -0.11
PDGFA-201ENST00000354513 H0YC42 278 aa14.34□□□□□ -0.11
PDGFA-201ENST00000354513 UBFD1O14562 309 aaKnown RBP14.34□□□□□ -0.11
PDGFA-201ENST00000354513 PLOD3O60568 738 aa14.34□□□□□ -0.11
PDGFA-201ENST00000354513 ABCB7O75027 752 aa14.34□□□□□ -0.11
PDGFA-201ENST00000354513 PSMG1O95456 288 aa14.34□□□□□ -0.11
PDGFA-201ENST00000354513 KRT6AP02538 564 aa14.34□□□□□ -0.11
PDGFA-201ENST00000354513 KRT6BP04259 564 aa14.34□□□□□ -0.11
PDGFA-201ENST00000354513 SNRPAP09012 282 aaKnown RBP14.34□□□□□ -0.11
PDGFA-201ENST00000354513 KRT6CP48668 564 aa14.34□□□□□ -0.11
PDGFA-201ENST00000354513 PNLIPRP2P54317 469 aa14.34□□□□□ -0.11
PDGFA-201ENST00000354513 FOXA1P55317 472 aa14.34□□□□□ -0.11
PDGFA-201ENST00000354513 TPD52P55327 224 aaPredicted RBP14.34□□□□□ -0.11
PDGFA-201ENST00000354513 KEAP1Q14145 624 aa14.34□□□□□ -0.11
PDGFA-201ENST00000354513 EFR3AQ14156 821 aa14.34□□□□□ -0.11
PDGFA-201ENST00000354513 SCIMPQ6UWF3 145 aa14.34□□□□□ -0.11
PDGFA-201ENST00000354513 LARP4Q71RC2 724 aaKnown RBP eCLIP14.34□□□□□ -0.11
PDGFA-201ENST00000354513 MREGQ8N565 214 aa14.34□□□□□ -0.11
PDGFA-201ENST00000354513 OR2M3Q8NG83 312 aa14.34□□□□□ -0.11
PDGFA-201ENST00000354513 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.34□□□□□ -0.11
PDGFA-201ENST00000354513 MZB1Q8WU39 189 aa14.34□□□□□ -0.11
PDGFA-201ENST00000354513 SMPDL3BQ92485 455 aa14.34□□□□□ -0.11
PDGFA-201ENST00000354513 L3HYPDHQ96EM0 354 aa14.34□□□□□ -0.11
PDGFA-201ENST00000354513 YIPF4Q9BSR8 244 aa14.34□□□□□ -0.11
PDGFA-201ENST00000354513 PIGMQ9H3S5 423 aa14.34□□□□□ -0.11
PDGFA-201ENST00000354513 PFDN4Q9NQP4 134 aa14.34□□□□□ -0.11
PDGFA-201ENST00000354513 SLC35C2Q9NQQ7 365 aa14.34□□□□□ -0.11
PDGFA-201ENST00000354513 NMRK1Q9NWW6 199 aa14.34□□□□□ -0.11
PDGFA-201ENST00000354513 SIRT5Q9NXA8 310 aa14.34□□□□□ -0.11
PDGFA-201ENST00000354513 DKKL1Q9UK85 242 aa14.34□□□□□ -0.11
PDGFA-201ENST00000354513 PACSIN3Q9UKS6 424 aa14.34□□□□□ -0.11
PDGFA-201ENST00000354513 NAV3Q8IVL0 2385 aa14.33□□□□□ -0.12
PDGFA-201ENST00000354513 DEFB108AA8MXU0 73 aa14.33□□□□□ -0.12
PDGFA-201ENST00000354513 MYO1GB0I1T2 1018 aa14.33□□□□□ -0.12
PDGFA-201ENST00000354513 FADS1O60427 444 aa14.33□□□□□ -0.12
PDGFA-201ENST00000354513 BCAS2O75934 225 aaPredicted RBP14.33□□□□□ -0.12
PDGFA-201ENST00000354513 DPP4P27487 766 aa14.33□□□□□ -0.12
PDGFA-201ENST00000354513 IL12BP29460 328 aa14.33□□□□□ -0.12
PDGFA-201ENST00000354513 HMOX2P30519 316 aa14.33□□□□□ -0.12
PDGFA-201ENST00000354513 EVI2BP34910 448 aa14.33□□□□□ -0.12
PDGFA-201ENST00000354513 GCKP35557 465 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms