RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 MANEAQ5SRI9 462 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 HBMQ6B0K9 141 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 ACSM5Q6NUN0 579 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 PRSS45Q7RTY3 260 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 MEIOBQ8N635 442 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 GNPDA2Q8TDQ7 276 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 HMGB4Q8WW32 186 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 SLC25A28Q96A46 364 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 CMTM7Q96FZ5 175 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 DUSP26Q9BV47 211 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 FN3KQ9H479 309 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 ZNF334Q9HCZ1 680 aaPredicted RBP12.48□□□□□ -0.41
IFT88-202ENST00000351808 ISYNA1Q9NPH2 558 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 DHCR7Q9UBM7 475 aaKnown RBP12.48□□□□□ -0.41
IFT88-202ENST00000351808 GHRLQ9UBU3 117 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 ST3GAL5Q9UNP4 418 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 ABHD14A-ACY1A0A1B0GW23 586 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 MEX3AA1L020 520 aaKnown RBP12.48□□□□□ -0.41
IFT88-202ENST00000351808 PIP5K1CO60331 668 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 HIST1H2ABP04908 130 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 PAICSP22234 425 aaKnown RBP12.48□□□□□ -0.41
IFT88-202ENST00000351808 LIM2P55344 173 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 DUSP4Q13115 394 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 CCDC157Q569K6 752 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 HACD4Q5VWC8 232 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 HIST3H2AQ7L7L0 130 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 CMIPQ8IY22 773 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 TBC1D19Q8N5T2 526 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 TMEM185AQ8NFB2 350 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 THAP6Q8TBB0 222 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 HIST1H2ACQ93077 130 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 EXOSC8Q96B26 276 aaKnown RBP12.48□□□□□ -0.41
IFT88-202ENST00000351808 TCEAL4Q96EI5 215 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 TRMT2BQ96GJ1 504 aaKnown RBP12.48□□□□□ -0.41
IFT88-202ENST00000351808 PTGFRNQ9P2B2 879 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 CACNG4Q9UBN1 327 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 CBLCQ9ULV8 474 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 PDCD11Q14690 1871 aaKnown RBP12.48□□□□□ -0.41
IFT88-202ENST00000351808 OR2M5A3KFT3 312 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 ARPC1BO15143 372 aaKnown RBP12.48□□□□□ -0.41
IFT88-202ENST00000351808 SHC1P29353 583 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 THBS2P35442 1172 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 GPX4P36969 197 aaPredicted RBP12.48□□□□□ -0.41
IFT88-202ENST00000351808 NR0B1P51843 470 aaKnown RBP12.48□□□□□ -0.41
IFT88-202ENST00000351808 MLLT1Q03111 559 aaPredicted RBP12.48□□□□□ -0.41
IFT88-202ENST00000351808 STX4Q12846 297 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 SV2CQ496J9 727 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 ACER2Q5QJU3 275 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 FAM109BQ6ICB4 259 aaPredicted RBP12.48□□□□□ -0.41
IFT88-202ENST00000351808 SVBPQ8N300 66 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 HJURPQ8NCD3 748 aaPredicted RBP12.48□□□□□ -0.41
IFT88-202ENST00000351808 CHST14Q8NCH0 376 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 OR51Q1Q8NH59 317 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 LCORQ96JN0 433 aaPredicted RBP12.48□□□□□ -0.41
IFT88-202ENST00000351808 GSDMCQ9BYG8 508 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 GPR52Q9Y2T5 361 aa12.48□□□□□ -0.41
IFT88-202ENST00000351808 LY86O95711 162 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 OPRD1P41143 372 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 PGFP49763 221 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 OAZ1P54368 228 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 GINS1Q14691 196 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 ZNF791Q3KP31 576 aaPredicted RBP12.47□□□□□ -0.41
IFT88-202ENST00000351808 ESPNLQ6ZVH7 1005 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 TEX26Q8N6G2 289 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 OR8J2Q8NGG1 315 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 TRMT10AQ8TBZ6 339 aaKnown RBP12.47□□□□□ -0.41
IFT88-202ENST00000351808 MRPS31Q92665 395 aaKnown RBP12.47□□□□□ -0.41
IFT88-202ENST00000351808 POLR1EQ9GZS1 481 aaKnown RBP12.47□□□□□ -0.41
IFT88-202ENST00000351808 ENTPD4Q9Y227 616 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 OR10H1Q9Y4A9 318 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 OARD1Q9Y530 152 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 LCTP09848 1927 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 ARRDC5A6NEK1 342 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 TXNL1O43396 289 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 PRKRAO75569 313 aaKnown RBP12.47□□□□□ -0.41
IFT88-202ENST00000351808 STK16O75716 305 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 F12P00748 615 aaPredicted RBP12.47□□□□□ -0.41
IFT88-202ENST00000351808 IFNW1P05000 195 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 ACP2P11117 423 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 EPORP19235 508 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 HOXA11P31270 313 aaPredicted RBP12.47□□□□□ -0.41
IFT88-202ENST00000351808 CTSOP43234 321 aaPredicted RBP12.47□□□□□ -0.41
IFT88-202ENST00000351808 HMGCS2P54868 508 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 PRR5P85299 388 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 FAM27D1Q5T7N8 215 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 SLC22A10Q63ZE4 541 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 FCRLBQ6BAA4 426 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 DHRS7BQ6IAN0 325 aaPredicted RBP12.47□□□□□ -0.41
IFT88-202ENST00000351808 SPICQ8N5J4 248 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 ZNF485Q8NCK3 441 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 ZFPM2Q8WW38 1151 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 FBXO17Q96EF6 278 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 OR1F2PQ96R84 312 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 POLDIP3Q9BY77 421 aaKnown RBP12.47□□□□□ -0.41
IFT88-202ENST00000351808 ENKD1Q9H0I2 346 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 SLC25A32Q9H2D1 315 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 FGF20Q9NP95 211 aaPredicted RBP12.47□□□□□ -0.41
IFT88-202ENST00000351808 AP1M2Q9Y6Q5 423 aa12.47□□□□□ -0.41
IFT88-202ENST00000351808 A0A1B0GV90 55 aa12.46□□□□□ -0.41
IFT88-202ENST00000351808 A0A1B0GW55 424 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms