RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 RPS26P62854 115 aaKnown RBP17.55■□□□□ 0.4
SCARF1-202ENST00000348987 RAB40BQ12829 278 aa17.55■□□□□ 0.4
SCARF1-202ENST00000348987 LYPD4Q6UWN0 246 aa17.55■□□□□ 0.4
SCARF1-202ENST00000348987 CPXM2Q8N436 756 aa17.55■□□□□ 0.4
SCARF1-202ENST00000348987 ST8SIA2Q92186 375 aa17.55■□□□□ 0.4
SCARF1-202ENST00000348987 DNAH14Q0VDD8 3507 aa17.55■□□□□ 0.4
SCARF1-202ENST00000348987 GSAPA4D1B5 854 aa17.54■□□□□ 0.4
SCARF1-202ENST00000348987 PROS1P07225 676 aa17.54■□□□□ 0.4
SCARF1-202ENST00000348987 B2MP61769 119 aa17.54■□□□□ 0.4
SCARF1-202ENST00000348987 RNASE12Q5GAN4 147 aaKnown RBP17.54■□□□□ 0.4
SCARF1-202ENST00000348987 CLVS2Q5SYC1 327 aa17.54■□□□□ 0.4
SCARF1-202ENST00000348987 SLC39A5Q6ZMH5 540 aa17.54■□□□□ 0.4
SCARF1-202ENST00000348987 TTLQ8NG68 377 aa17.54■□□□□ 0.4
SCARF1-202ENST00000348987 OR4D11Q8NGI4 311 aa17.54■□□□□ 0.4
SCARF1-202ENST00000348987 ZNF558Q96NG5 402 aa17.54■□□□□ 0.4
SCARF1-202ENST00000348987 REEP4Q9H6H4 257 aa17.54■□□□□ 0.4
SCARF1-202ENST00000348987 ISYNA1Q9NPH2 558 aa17.54■□□□□ 0.4
SCARF1-202ENST00000348987 GULP1Q9UBP9 304 aa17.54■□□□□ 0.4
SCARF1-202ENST00000348987 HRH3Q9Y5N1 445 aa17.54■□□□□ 0.4
SCARF1-202ENST00000348987 COL4A6Q14031 1691 aa17.54■□□□□ 0.4
SCARF1-202ENST00000348987 TSPAN6O43657 245 aa17.54■□□□□ 0.4
SCARF1-202ENST00000348987 SSNA1O43805 119 aa17.54■□□□□ 0.4
SCARF1-202ENST00000348987 NME6O75414 186 aaPredicted RBP17.54■□□□□ 0.4
SCARF1-202ENST00000348987 POP4O95707 220 aaKnown RBP17.54■□□□□ 0.4
SCARF1-202ENST00000348987 MPC1LP0DKB6 136 aa17.54■□□□□ 0.4
SCARF1-202ENST00000348987 TIA1P31483 386 aaKnown RBP eCLIP17.54■□□□□ 0.43e-6■■□□□ 11.6
SCARF1-202ENST00000348987 CCR6P51684 374 aa17.54■□□□□ 0.4
SCARF1-202ENST00000348987 AP1S2P56377 157 aa17.54■□□□□ 0.4
SCARF1-202ENST00000348987 GRM7Q14831 915 aa17.54■□□□□ 0.4
SCARF1-202ENST00000348987 PLEKHS1Q5SXH7 462 aa17.54■□□□□ 0.4
SCARF1-202ENST00000348987 AGTRAPQ6RW13 159 aa17.54■□□□□ 0.4
SCARF1-202ENST00000348987 MEX3DQ86XN8 651 aaKnown RBP17.54■□□□□ 0.4
SCARF1-202ENST00000348987 OR2A12Q8NGT7 310 aa17.54■□□□□ 0.4
SCARF1-202ENST00000348987 C12orf66Q96MD2 445 aa17.54■□□□□ 0.4
SCARF1-202ENST00000348987 ABHD1Q96SE0 405 aa17.54■□□□□ 0.4
SCARF1-202ENST00000348987 RIOK2Q9BVS4 552 aaKnown RBP17.54■□□□□ 0.4
SCARF1-202ENST00000348987 CFHR5Q9BXR6 569 aa17.54■□□□□ 0.4
SCARF1-202ENST00000348987 CYSLTR2Q9NS75 346 aa17.54■□□□□ 0.4
SCARF1-202ENST00000348987 NUBP2Q9Y5Y2 271 aa17.54■□□□□ 0.4
SCARF1-202ENST00000348987 MFSD2BA6NFX1 497 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 NEDD8-MDP1E9PL57 170 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 LGALS8O00214 317 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 SAP18O00422 153 aaKnown RBP17.53■□□□□ 0.4
SCARF1-202ENST00000348987 TGM5O43548 720 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 HRO43593 1189 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 RGS11O94810 467 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 HSD3B1P14060 373 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 PDHA2P29803 388 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 CCR2P41597 374 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 MTNR1AP48039 350 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 EIF2B5Q13144 721 aaKnown RBP17.53■□□□□ 0.4
SCARF1-202ENST00000348987 PIN1Q13526 163 aaPredicted RBP17.53■□□□□ 0.4
SCARF1-202ENST00000348987 GPR68Q15743 365 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 REEP3Q6NUK4 255 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 TECPR1Q7Z6L1 1165 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 ZNF687Q8N1G0 1237 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 OR5M3Q8NGP4 307 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 ASZ1Q8WWH4 475 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 FGF11Q92914 225 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 OSGEPL1Q9H4B0 414 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 SYNDIG1Q9H7V2 258 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 FGF20Q9NP95 211 aaPredicted RBP17.53■□□□□ 0.4
SCARF1-202ENST00000348987 FBXW2Q9UKT8 454 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 SLC9A8Q9Y2E8 581 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 A0A1B0GVI7 797 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 G3V3Q6 166 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 BCHEP06276 602 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 EPHX1P07099 455 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 SULT1A3P0DMM9 295 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 SULT1A4P0DMN0 295 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 PITPNBP48739 271 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 DSTNP60981 165 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 RPS13P62277 151 aaKnown RBP17.53■□□□□ 0.4
SCARF1-202ENST00000348987 SLC7A9P82251 487 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 TFAP2EQ6VUC0 442 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 SAMD12Q8N8I0 201 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 ZNF485Q8NCK3 441 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 GIMAP1Q8WWP7 306 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 SMG7Q92540 1137 aaKnown RBP17.53■□□□□ 0.4
SCARF1-202ENST00000348987 CXorf58Q96LI9 332 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 UBL7Q96S82 380 aaPredicted RBP17.53■□□□□ 0.4
SCARF1-202ENST00000348987 GPA33Q99795 319 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 STOX2Q9P2F5 926 aaPredicted RBP17.53■□□□□ 0.4
SCARF1-202ENST00000348987 ATPIF1Q9UII2 106 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 KIF25Q9UIL4 384 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 SCP2D1Q9UJQ7 156 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 SPATA2Q9UM82 520 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 ZFR2Q9UPR6 939 aaKnown RBP17.53■□□□□ 0.4
SCARF1-202ENST00000348987 RNF215Q9Y6U7 377 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 OBSL1O75147 1896 aa17.53■□□□□ 0.4
SCARF1-202ENST00000348987 SLC22A23A1A5C7 686 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 SLCO2B1O94956 709 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 CCL5P13501 91 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 MMP11P24347 488 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 EFNB1P98172 346 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 SP140Q13342 867 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 GSG1Q2KHT4 349 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 PRSS53Q2L4Q9 553 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 SLC36A2Q495M3 483 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 NHLRC3Q5JS37 347 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms