RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 A0A0A6YYJ9 748 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 A8MX80 341 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 LINC01565O15544 149 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 SLCO2B1O94956 709 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 ETHE1O95571 254 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 RRASP10301 218 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 SOAT1P35610 550 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 FEN1P39748 380 aaKnown RBP14.93□□□□□ -0.02
HMGA1-202ENST00000347617 MMP12P39900 470 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 RFX3P48380 749 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 KCNJ5P48544 419 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 MTNR1BP49286 362 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 RPS13P62277 151 aaKnown RBP14.93□□□□□ -0.02
HMGA1-202ENST00000347617 BDH1Q02338 343 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 SNTA1Q13424 505 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 FLYWCH1Q4VC44 716 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 FNDC3BQ53EP0 1204 aaKnown RBP14.93□□□□□ -0.02
HMGA1-202ENST00000347617 TYW3Q6IPR3 259 aaKnown RBP14.93□□□□□ -0.02
HMGA1-202ENST00000347617 TCTN3Q6NUS6 607 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 GLCCI1Q86VQ1 547 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 MARCH9Q86YJ5 346 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 TDHQ8IZJ6 230 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 OR8K5Q8NH50 307 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 OR52N1Q8NH53 320 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 C16orf78Q8WTQ4 265 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 MYLIPQ8WY64 445 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 RFKQ969G6 155 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 NEURL3Q96EH8 262 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 SLC38A2Q96QD8 506 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 MYADMQ96S97 322 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 BTBD1Q9H0C5 482 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 CYSLTR2Q9NS75 346 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 LYARQ9NX58 379 aaKnown RBP14.93□□□□□ -0.02
HMGA1-202ENST00000347617 CLEC1BQ9P126 229 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 CLCA2Q9UQC9 943 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 CSNK1G3Q9Y6M4 447 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 KIAA1549LQ6ZVL6 1849 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 KDM4EB2RXH2 506 aaPredicted RBP14.93□□□□□ -0.02
HMGA1-202ENST00000347617 SMLR1H3BR10 107 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 CASC3O15234 703 aaKnown RBP14.93□□□□□ -0.02
HMGA1-202ENST00000347617 SLC28A2O43868 658 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 TBX19O60806 448 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 MTNR1AP48039 350 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 SHC2P98077 582 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 GALEQ14376 348 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 ZNF234Q14588 700 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 CYP27C1Q4G0S4 372 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 HENMT1Q5T8I9 393 aaKnown RBP14.93□□□□□ -0.02
HMGA1-202ENST00000347617 ZNF765Q7L2R6 523 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 GPAT4Q86UL3 456 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 SDR16C5Q8N3Y7 309 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 ZNF366Q8N895 744 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 GPR156Q8NFN8 814 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 OR5M3Q8NGP4 307 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 NEIL3Q8TAT5 605 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 WACQ9BTA9 647 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 JAM3Q9BX67 310 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 HEXA-AS1Q9H8Q6 139 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 STOX2Q9P2F5 926 aaPredicted RBP14.93□□□□□ -0.02
HMGA1-202ENST00000347617 GLS2Q9UI32 602 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 KIF25Q9UIL4 384 aa14.93□□□□□ -0.02
HMGA1-202ENST00000347617 MUC22E2RYF6 1773 aaPredicted RBP14.92□□□□□ -0.02
HMGA1-202ENST00000347617 RPS10-NUDT3A0A1W2PQS6 291 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 TBC1D3BA6NDS4 549 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 IFNGR2P38484 337 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 AVPR1BP47901 424 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 CNTN1Q12860 1018 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 NAE1Q13564 534 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 ENPP2Q13822 863 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 NFE2L1Q14494 772 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 SNAPC1Q16533 368 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 ITPRIPL2Q3MIP1 535 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 HIST2H2AA3Q6FI13 130 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 C1orf94Q6P1W5 598 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 TMEM65Q6PI78 240 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 TMIGD1Q6UXZ0 262 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 LIPIQ6XZB0 460 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 MTSS1LQ765P7 747 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 COMMD6Q7Z4G1 85 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 PRSS42Q7Z5A4 293 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 HSD11B1LQ7Z5J1 315 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 FGD2Q7Z6J4 655 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 VRK3Q8IV63 474 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 KLHL36Q8N4N3 616 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 SYT14Q8NB59 555 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 ZNF485Q8NCK3 441 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 OR5P2Q8WZ92 322 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 RAB7BQ96AH8 199 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 CCDC120Q96HB5 630 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 NECTIN4Q96NY8 510 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 TEX12Q9BXU0 123 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 PLA2G2FQ9BZM2 168 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 ACTR6Q9GZN1 396 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 OR51J1Q9H342 316 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 EXTL2Q9UBQ6 330 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 KLF15Q9UIH9 416 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 MAB21L2Q9Y586 359 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 CACNG2Q9Y698 323 aa14.92□□□□□ -0.02
HMGA1-202ENST00000347617 PRRC2BQ5JSZ5 2229 aaKnown RBP14.92□□□□□ -0.02
HMGA1-202ENST00000347617 DOCK8Q8NF50 2099 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms