RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 HMGN2P46Q86SG4 172 aa19.96■□□□□ 0.79
TSPAN3-202ENST00000346495 VRK2Q86Y07 508 aa19.96■□□□□ 0.79
TSPAN3-202ENST00000346495 TMEM151BQ8IW70 566 aa19.96■□□□□ 0.79
TSPAN3-202ENST00000346495 PRODH2Q9UF12 536 aa19.96■□□□□ 0.79
TSPAN3-202ENST00000346495 KCND3Q9UK17 655 aa19.96■□□□□ 0.79
TSPAN3-202ENST00000346495 PCDHGA8Q9Y5G5 932 aa19.96■□□□□ 0.79
TSPAN3-202ENST00000346495 FER1L5A0AVI2 2057 aa19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 IGLV3-12A0A075B6K2 115 aa19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 GADD45GO95257 159 aa19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 EPPINO95925 133 aa19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 LYNP07948 512 aa19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 GUSBP08236 651 aa19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 MYF6P23409 242 aa19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 IGFBP5P24593 272 aa19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 PSG6Q00889 435 aa19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 LARS2Q15031 903 aaKnown RBP19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 SF3A2Q15428 464 aaKnown RBP19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 ELAVL1Q15717 326 aaKnown RBP19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 ZIK1Q3SY52 487 aaPredicted RBP19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 NKAIN1Q4KMZ8 207 aa19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 ANKRD34AQ69YU3 496 aa19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 TCTN3Q6NUS6 607 aa19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 DEF8Q6ZN54 512 aa19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 ZNF615Q8N8J6 731 aa19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 PLPP5Q8NEB5 264 aa19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 OR4D11Q8NGI4 311 aa19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 GIPC3Q8TF64 312 aa19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 PTPMT1Q8WUK0 201 aaPredicted RBP19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 FKBP10Q96AY3 582 aa19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 ZG16BQ96DA0 208 aa19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 TOR3AQ9H497 397 aa19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 SLC22A11Q9NSA0 550 aa19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 ACER3Q9NUN7 267 aa19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 KLHL28Q9NXS3 571 aa19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 KIF17Q9P2E2 1029 aa19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 TMEFF2Q9UIK5 374 aaPredicted RBP19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 ZNF443Q9Y2A4 671 aaPredicted RBP19.95■□□□□ 0.78
TSPAN3-202ENST00000346495 GXYLT2A0PJZ3 443 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 PRR33A8MZF0 331 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 M0R3H8 397 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 CDX4O14627 284 aaPredicted RBP19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 ONECUT2O95948 504 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 THBS1P07996 1170 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 DAPP51397 102 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 DCDP81605 110 aaKnown RBP19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 OCA2Q04671 838 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 GPR68Q15743 365 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 COLEC12Q5KU26 742 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 KDM4DQ6B0I6 523 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 KRT80Q6KB66 452 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 FAHD1Q6P587 224 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 COMTD1Q86VU5 262 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 LACC1Q8IV20 430 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 SLC38A9Q8NBW4 561 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 C16orf52Q8NHV5 167 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 PHF10Q8WUB8 498 aaKnown RBP19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 SENP5Q96HI0 755 aaPredicted RBP19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 FBXL20Q96IG2 436 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 ARHGDIGQ99819 225 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 VN1R1Q9GZP7 353 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 C14orf105Q9NVL8 296 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 CTSFQ9UBX1 484 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 MKL2Q9ULH7 1088 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 CLCA3PQ9Y6N3 262 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 AGAP5A6NIR3 686 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 KIAA0513O60268 411 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 BRINP1O60477 761 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 KCNK2O95069 426 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 DBIP07108 87 aaKnown RBP19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 CD59P13987 128 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 TRHRP34981 398 aaPredicted RBP19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 LIMS1P48059 325 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 SMIM11AP58511 58 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 GANABQ14697 944 aaKnown RBP19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 NSDHLQ15738 373 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 MICAQ29983 383 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 EXOC3L2Q2M3D2 409 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 TTC23Q5W5X9 447 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 AP1ARQ63HQ0 302 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 FIGNL1Q6PIW4 674 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 RBM45Q8IUH3 476 aaKnown RBP19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 BMPERQ8N8U9 685 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 ATG16L2Q8NAA4 619 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 ZNF555Q8NEP9 628 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 OR52J3Q8NH60 311 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 RMND5BQ96G75 393 aaPredicted RBP19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 DHRS1Q96LJ7 313 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 MBOAT4Q96T53 435 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 APMAPQ9HDC9 416 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 Q9N2J8 555 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 ACAD8Q9UKU7 415 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 HCN4Q9Y3Q4 1203 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 NINQ8N4C6 2090 aa19.94■□□□□ 0.78
TSPAN3-202ENST00000346495 FFAR1O14842 300 aa19.93■□□□□ 0.78
TSPAN3-202ENST00000346495 POLR1CO15160 346 aaPredicted RBP19.93■□□□□ 0.78
TSPAN3-202ENST00000346495 CLPSP04118 112 aa19.93■□□□□ 0.78
TSPAN3-202ENST00000346495 IL7RP16871 459 aa19.93■□□□□ 0.78
TSPAN3-202ENST00000346495 CDH2P19022 906 aaPredicted RBP19.93■□□□□ 0.78
TSPAN3-202ENST00000346495 RPS4Y1P22090 263 aaKnown RBP19.93■□□□□ 0.78
TSPAN3-202ENST00000346495 EIPR1Q53HC9 387 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms