RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 CHCHD4Q8N4Q1 142 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 MFSD2AQ8NA29 543 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 OR11L1Q8NGX0 322 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 IL17FQ96PD4 163 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 WASH6PQ9NQA3 447 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 NLGN3Q9NZ94 848 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 SATB2Q9UPW6 733 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 CROCCQ5TZA2 2017 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 DOCK5Q9H7D0 1870 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 COL24A1Q17RW2 1714 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 PSMD9O00233 223 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 RFPL3O75679 317 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 HPRP00739 348 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 ZNF43P17038 809 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 MAGEA8P43361 318 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 SLC6A11P48066 632 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 TBPL1P62380 186 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 SHC2P98077 582 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 SCN1BQ07699 218 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 NXPE4Q6UWF7 544 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 ZNF101Q8IZC7 436 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 CHST14Q8NCH0 376 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 ANKK1Q8NFD2 765 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 TRIM63Q969Q1 353 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 FEVQ99581 238 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 PAK6Q9NQU5 681 aaPredicted RBP10.3□□□□□ -0.76
CLCN6-202ENST00000346436 FAIMQ9NVQ4 179 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 PCDHA9Q9Y5H5 950 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 LOXHD1Q8IVV2 1947 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 SLC9B1P1A6NJY1 282 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 ADAM12O43184 909 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 C1QAP02745 245 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 C7P10643 843 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 PSKH1P11801 424 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 UCNP55089 124 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 DCAF7P61962 342 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 CD83Q01151 205 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 CDK5R2Q13319 367 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 LAIR1Q6GTX8 287 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 ZNF765Q7L2R6 523 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 UEVLDQ8IX04 471 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 TCEANCQ8N8B7 351 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 ZFP90Q8TF47 636 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 PPP1R14BQ96C90 147 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 HS6ST2Q96MM7 605 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 PCED1AQ9H1Q7 454 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 SPHK1Q9NYA1 384 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 IL17CQ9P0M4 197 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 GMEB1Q9Y692 573 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 A0A0X1KG70 313 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 NPIPB15A6NHN6 443 aaPredicted RBP10.3□□□□□ -0.76
CLCN6-202ENST00000346436 CDRT1O95170 752 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 UQCRC2P22695 453 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 GRIK2Q13002 908 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 CBARPQ8N350 705 aaPredicted RBP10.3□□□□□ -0.76
CLCN6-202ENST00000346436 OR8K5Q8NH50 307 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 SLCO4A1Q96BD0 722 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 MAELQ96JY0 434 aaKnown RBP10.3□□□□□ -0.76
CLCN6-202ENST00000346436 BEX2Q9BXY8 128 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 REEP4Q9H6H4 257 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 PARPBPQ9NWS1 579 aa10.3□□□□□ -0.76
CLCN6-202ENST00000346436 TMEM184BQ9Y519 407 aaPredicted RBP10.3□□□□□ -0.76
CLCN6-202ENST00000346436 CCDC187A0A096LP49 1063 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 PIGBOS1A0A0B4J2F0 54 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 H1F0P07305 194 aaKnown RBP10.29□□□□□ -0.76
CLCN6-202ENST00000346436 CSNK1DP48730 415 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 RORCP51449 518 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 PSPHP78330 225 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 EEF1A2Q05639 463 aaKnown RBP10.29□□□□□ -0.76
CLCN6-202ENST00000346436 ADNP2Q6IQ32 1131 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 DTX3Q8N9I9 347 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 NLGN4YQ8NFZ3 816 aaPredicted RBP10.29□□□□□ -0.76
CLCN6-202ENST00000346436 LKAAEAR1Q8TD35 194 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 TRUB1Q8WWH5 349 aaKnown RBP10.29□□□□□ -0.76
CLCN6-202ENST00000346436 GPN1Q9HCN4 374 aaPredicted RBP10.29□□□□□ -0.76
CLCN6-202ENST00000346436 ERVK13-1Q9NX77 482 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 THAP10Q9P2Z0 257 aaPredicted RBP10.29□□□□□ -0.76
CLCN6-202ENST00000346436 CD300AQ9UGN4 299 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 ABCG2Q9UNQ0 655 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 hCG_1809904A0A1W2PP81 198 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 A0A1W2PPE2 198 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 A0A1W2PR64 198 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 A0A1W2PRV1 198 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 EEF1E1-BLOC1S5C9J1V9 151 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 MPPED1O15442 326 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 EEF1E1O43324 174 aaKnown RBP10.29□□□□□ -0.76
CLCN6-202ENST00000346436 EGFP01133 1207 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 IL1RNP18510 177 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 SSR4P51571 173 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 CLDN8P56748 225 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 HSD11B2P80365 405 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 DEFB110Q30KQ9 67 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 GXYLT1Q4G148 440 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 OR4C11Q6IEV9 310 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 Q6ZPB1 254 aaPredicted RBP10.29□□□□□ -0.76
CLCN6-202ENST00000346436 NCCRP1Q6ZVX7 275 aaPredicted RBP10.29□□□□□ -0.76
CLCN6-202ENST00000346436 YIPF7Q8N8F6 280 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 NUP43Q8NFH3 380 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 TMED9Q9BVK6 235 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 CUTCQ9NTM9 273 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms