RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 CYR61O00622 381 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 BCAT2O15382 392 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-202ENST00000345734 SUSD5O60279 629 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 LDB3O75112 727 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 ALX3O95076 343 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 MED26O95402 600 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 ZNF10P21506 573 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-202ENST00000345734 TLX1P31314 330 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-202ENST00000345734 RXRGP48443 463 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 PPM1FP49593 454 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-202ENST00000345734 CLK3P49761 638 aaKnown RBP8.63□□□□□ -1.03
ATG4A-202ENST00000345734 TPD52P55327 224 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-202ENST00000345734 GFERP55789 205 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 HNRNPKP61978 463 aaKnown RBP eCLIP8.63□□□□□ -1.03
ATG4A-202ENST00000345734 PRR5P85299 388 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 SIM2Q14190 667 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-202ENST00000345734 GANABQ14697 944 aaKnown RBP8.63□□□□□ -1.03
ATG4A-202ENST00000345734 MEP1AQ16819 746 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 EXOC3L2Q2M3D2 409 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 CTU2Q2VPK5 515 aaKnown RBP8.63□□□□□ -1.03
ATG4A-202ENST00000345734 RFX4Q33E94 735 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 MANEAQ5SRI9 462 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 FAHD1Q6P587 224 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 SLC36A4Q6YBV0 504 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 C17orf82Q86X59 251 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-202ENST00000345734 RBM45Q8IUH3 476 aaKnown RBP8.63□□□□□ -1.03
ATG4A-202ENST00000345734 UBALD2Q8IYN6 164 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 C8orf59Q8N0T1 100 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-202ENST00000345734 CA13Q8N1Q1 262 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 OR4D11Q8NGI4 311 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 OR9A4Q8NGU2 314 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 DNASE2BQ8WZ79 361 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 GIMAP5Q96F15 307 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 OR7D2Q96RA2 312 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 ING2Q9H160 280 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 C3orf14Q9HBI5 128 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 LYRM4Q9HD34 91 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 RLIMQ9NVW2 624 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 ADAM30Q9UKF2 790 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 A0A1B0GVT2 93 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 TRIM64A6NGJ6 449 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 LILRA5A6NI73 299 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 FFAR1O14842 300 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 BCKDKO14874 412 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 ADAMDEC1O15204 470 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 SLC16A6O15403 523 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 FGF17O60258 216 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 EIF4EBP3O60516 100 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-202ENST00000345734 SEMA7AO75326 666 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 RDH16O75452 317 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 JRKO75564 520 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 PIAS2O75928 621 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 DNAJB5O75953 348 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 PDE9AO76083 593 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 PDGFBP01127 241 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-202ENST00000345734 ITGAMP11215 1152 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 CPMP14384 443 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 MAN2A2P49641 1150 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 NR1H2P55055 460 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 C21orf59P57076 290 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 ZC3H12BQ5HYM0 836 aaKnown RBP8.63□□□□□ -1.03
ATG4A-202ENST00000345734 ZNF691Q5VV52 312 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 LAIR2Q6ISS4 152 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 BHLHB9Q6PI77 547 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 ZNF605Q86T29 641 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 LACC1Q8IV20 430 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 ARHGEF39Q8N4T4 335 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 DNAJC22Q8N4W6 341 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 SLC5A8Q8N695 610 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 VANGL1Q8TAA9 524 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-202ENST00000345734 GIPC3Q8TF64 312 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 TMIGD2Q96BF3 282 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 MOAP1Q96BY2 351 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 TGM7Q96PF1 710 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 ZNF607Q96SK3 696 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 PIP5K1AQ99755 562 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 QRSL1Q9H0R6 528 aaKnown RBP8.63□□□□□ -1.03
ATG4A-202ENST00000345734 UCK1Q9HA47 277 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 KRT84Q9NSB2 600 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 ACER3Q9NUN7 267 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 MS4A12Q9NXJ0 267 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 SEC14L3Q9UDX4 400 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 ENPP4Q9Y6X5 453 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 PCDH17O14917 1159 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 IFNW1P05000 195 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 MYF5P13349 255 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 ITGA2P17301 1181 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 RHCEP18577 417 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 ENPP1P22413 925 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 PPP2R1BP30154 601 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 KCNJ5P48544 419 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 TMED10P49755 219 aaKnown RBP8.62□□□□□ -1.03
ATG4A-202ENST00000345734 AFF3P51826 1226 aaKnown RBP8.62□□□□□ -1.03
ATG4A-202ENST00000345734 CRISP3P54108 245 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 ISL1P61371 349 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 CD47Q08722 323 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 BNIP3Q12983 259 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 SRSF5Q13243 272 aaKnown RBP8.62□□□□□ -1.03
ATG4A-202ENST00000345734 RAPSNQ13702 412 aa8.62□□□□□ -1.03
ATG4A-202ENST00000345734 PRTGQ2VWP7 1150 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms