RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 OSBPL11Q9BXB4 747 aa13.17□□□□□ -0.3
HMGN3-202ENST00000344726 STMN4Q9H169 189 aaPredicted RBP13.17□□□□□ -0.3
HMGN3-202ENST00000344726 EML4Q9HC35 981 aaKnown RBP13.17□□□□□ -0.3
HMGN3-202ENST00000344726 TAS2R9Q9NYW1 312 aa13.17□□□□□ -0.3
HMGN3-202ENST00000344726 Q9UFV3 132 aa13.17□□□□□ -0.3
HMGN3-202ENST00000344726 C19orf53Q9UNZ5 99 aaPredicted RBP13.17□□□□□ -0.3
HMGN3-202ENST00000344726 PRAMEF25A6NGN4 478 aa13.16□□□□□ -0.3
HMGN3-202ENST00000344726 FIGNL2A6NMB9 653 aa13.16□□□□□ -0.3
HMGN3-202ENST00000344726 C17orf51A8MQB3 221 aa13.16□□□□□ -0.3
HMGN3-202ENST00000344726 RGS16O15492 202 aaPredicted RBP13.16□□□□□ -0.3
HMGN3-202ENST00000344726 TRAPPC6AO75865 159 aa13.16□□□□□ -0.3
HMGN3-202ENST00000344726 BCKDHAP12694 445 aa13.16□□□□□ -0.3
HMGN3-202ENST00000344726 CRYZQ08257 329 aaKnown RBP13.16□□□□□ -0.3
HMGN3-202ENST00000344726 ZNF155Q12901 538 aaPredicted RBP13.16□□□□□ -0.3
HMGN3-202ENST00000344726 SNTA1Q13424 505 aa13.16□□□□□ -0.3
HMGN3-202ENST00000344726 PDE7AQ13946 482 aa13.16□□□□□ -0.3
HMGN3-202ENST00000344726 MPP2Q14168 576 aa13.16□□□□□ -0.3
HMGN3-202ENST00000344726 EIPR1Q53HC9 387 aa13.16□□□□□ -0.3
HMGN3-202ENST00000344726 WLSQ5T9L3 541 aa13.16□□□□□ -0.3
HMGN3-202ENST00000344726 SLC30A6Q6NXT4 461 aa13.16□□□□□ -0.3
HMGN3-202ENST00000344726 B3GNT6Q6ZMB0 384 aa13.16□□□□□ -0.3
HMGN3-202ENST00000344726 MEX3BQ6ZN04 569 aaKnown RBP13.16□□□□□ -0.3
HMGN3-202ENST00000344726 OR2L13Q8N349 312 aa13.16□□□□□ -0.3
HMGN3-202ENST00000344726 LIX1Q8N485 282 aa13.16□□□□□ -0.3
HMGN3-202ENST00000344726 OR1J4Q8NGS1 313 aa13.16□□□□□ -0.3
HMGN3-202ENST00000344726 RNF138Q8WVD3 245 aa13.16□□□□□ -0.3
HMGN3-202ENST00000344726 ASB5Q8WWX0 329 aa13.16□□□□□ -0.3
HMGN3-202ENST00000344726 EFHD2Q96C19 240 aaPredicted RBP13.16□□□□□ -0.3
HMGN3-202ENST00000344726 ELP4Q96EB1 424 aa13.16□□□□□ -0.3
HMGN3-202ENST00000344726 ZNF764Q96H86 408 aaPredicted RBP13.16□□□□□ -0.3
HMGN3-202ENST00000344726 REEP4Q9H6H4 257 aa13.16□□□□□ -0.3
HMGN3-202ENST00000344726 ZNF395Q9H8N7 513 aaPredicted RBP13.16□□□□□ -0.3
HMGN3-202ENST00000344726 ALKBH4Q9NXW9 302 aa13.16□□□□□ -0.3
HMGN3-202ENST00000344726 KLRF1Q9NZS2 232 aa13.16□□□□□ -0.3
HMGN3-202ENST00000344726 MAPRE3Q9UPY8 281 aa13.16□□□□□ -0.3
HMGN3-202ENST00000344726 SLC6A5Q9Y345 797 aa13.16□□□□□ -0.3
HMGN3-202ENST00000344726 TMED5Q9Y3A6 229 aa13.16□□□□□ -0.3
HMGN3-202ENST00000344726 C15orf38-AP3S2A0A0A6YYH1 394 aa13.15□□□□□ -0.3
HMGN3-202ENST00000344726 PDPK1O15530 556 aa13.15□□□□□ -0.3
HMGN3-202ENST00000344726 CTIFO43310 598 aaKnown RBP13.15□□□□□ -0.3
HMGN3-202ENST00000344726 ITM2AO43736 263 aa13.15□□□□□ -0.3
HMGN3-202ENST00000344726 TBX19O60806 448 aa13.15□□□□□ -0.3
HMGN3-202ENST00000344726 WDR1O75083 606 aa13.15□□□□□ -0.3
HMGN3-202ENST00000344726 COQ9O75208 318 aa13.15□□□□□ -0.3
HMGN3-202ENST00000344726 SKAP2O75563 359 aaPredicted RBP13.15□□□□□ -0.3
HMGN3-202ENST00000344726 LYPLA1O75608 230 aaPredicted RBP13.15□□□□□ -0.3
HMGN3-202ENST00000344726 SLITRK5O94991 958 aa13.15□□□□□ -0.3
HMGN3-202ENST00000344726 ELAVL4P26378 380 aaKnown RBP13.15□□□□□ -0.3
HMGN3-202ENST00000344726 MSX1P28360 303 aa13.15□□□□□ -0.3
HMGN3-202ENST00000344726 SERPINB5P36952 375 aa13.15□□□□□ -0.3
HMGN3-202ENST00000344726 FRKP42685 505 aaPredicted RBP13.15□□□□□ -0.3
HMGN3-202ENST00000344726 SERPINB4P48594 390 aa13.15□□□□□ -0.3
HMGN3-202ENST00000344726 WNT3P56703 355 aa13.15□□□□□ -0.3
HMGN3-202ENST00000344726 HSPB3Q12988 150 aa13.15□□□□□ -0.3
HMGN3-202ENST00000344726 WIPI1Q5MNZ9 446 aaPredicted RBP13.15□□□□□ -0.3
HMGN3-202ENST00000344726 CEP85LQ5SZL2 805 aa13.15□□□□□ -0.3
HMGN3-202ENST00000344726 DCST1Q5T197 706 aa13.15□□□□□ -0.3
HMGN3-202ENST00000344726 C1orf185Q5T7R7 199 aa13.15□□□□□ -0.3
HMGN3-202ENST00000344726 ACAD11Q709F0 780 aa13.15□□□□□ -0.3
HMGN3-202ENST00000344726 LARP4Q71RC2 724 aaKnown RBP eCLIP13.15□□□□□ -0.3
HMGN3-202ENST00000344726 NUDCD3Q8IVD9 361 aa13.15□□□□□ -0.3
HMGN3-202ENST00000344726 ULK2Q8IYT8 1036 aa13.15□□□□□ -0.3
HMGN3-202ENST00000344726 FAM83FQ8NEG4 500 aaPredicted RBP13.15□□□□□ -0.3
HMGN3-202ENST00000344726 NUDT8Q8WV74 236 aa13.15□□□□□ -0.3
HMGN3-202ENST00000344726 TIMP4Q99727 224 aa13.15□□□□□ -0.3
HMGN3-202ENST00000344726 RUBCNLQ9H714 662 aa13.15□□□□□ -0.3
HMGN3-202ENST00000344726 SERHLQ9NQF3 203 aa13.15□□□□□ -0.3
HMGN3-202ENST00000344726 DDX18Q9NVP1 670 aaKnown RBP13.15□□□□□ -0.3
HMGN3-202ENST00000344726 WDR91A4D1P6 747 aa13.14□□□□□ -0.31
HMGN3-202ENST00000344726 PEX11AO75192 247 aa13.14□□□□□ -0.31
HMGN3-202ENST00000344726 DHRS4L1P0CG22 281 aa13.14□□□□□ -0.31
HMGN3-202ENST00000344726 CYP4B1P13584 511 aa13.14□□□□□ -0.31
HMGN3-202ENST00000344726 EFNA1P20827 205 aaPredicted RBP13.14□□□□□ -0.31
HMGN3-202ENST00000344726 PNLIPRP2P54317 469 aa13.14□□□□□ -0.31
HMGN3-202ENST00000344726 GAS1P54826 345 aa13.14□□□□□ -0.31
HMGN3-202ENST00000344726 GAB1Q13480 694 aa13.14□□□□□ -0.31
HMGN3-202ENST00000344726 TOMM20Q15388 145 aa13.14□□□□□ -0.31
HMGN3-202ENST00000344726 C6orf136Q5SQH8 315 aa13.14□□□□□ -0.31
HMGN3-202ENST00000344726 VASNQ6EMK4 673 aa13.14□□□□□ -0.31
HMGN3-202ENST00000344726 YRDCQ86U90 279 aaKnown RBP13.14□□□□□ -0.31
HMGN3-202ENST00000344726 NAXEQ8NCW5 288 aa13.14□□□□□ -0.31
HMGN3-202ENST00000344726 ZDHHC16Q969W1 377 aa13.14□□□□□ -0.31
HMGN3-202ENST00000344726 PPCDCQ96CD2 204 aa13.14□□□□□ -0.31
HMGN3-202ENST00000344726 TMCO6Q96DC7 493 aa13.14□□□□□ -0.31
HMGN3-202ENST00000344726 LMF2Q9BU23 707 aaKnown RBP13.14□□□□□ -0.31
HMGN3-202ENST00000344726 C1orf50Q9BV19 199 aa13.14□□□□□ -0.31
HMGN3-202ENST00000344726 UGT2B28Q9BY64 529 aa13.14□□□□□ -0.31
HMGN3-202ENST00000344726 C20orf27Q9GZN8 174 aa13.14□□□□□ -0.31
HMGN3-202ENST00000344726 SSU72Q9NP77 194 aaKnown RBP13.14□□□□□ -0.31
HMGN3-202ENST00000344726 FLRT3Q9NZU0 649 aa13.14□□□□□ -0.31
HMGN3-202ENST00000344726 SH3BP4Q9P0V3 963 aa13.14□□□□□ -0.31
HMGN3-202ENST00000344726 OR10H1Q9Y4A9 318 aa13.14□□□□□ -0.31
HMGN3-202ENST00000344726 PCDHGB3Q9Y5G1 929 aa13.14□□□□□ -0.31
HMGN3-202ENST00000344726 WIF1Q9Y5W5 379 aa13.14□□□□□ -0.31
HMGN3-202ENST00000344726 MPDZO75970 2070 aa13.13□□□□□ -0.31
HMGN3-202ENST00000344726 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.13□□□□□ -0.31
HMGN3-202ENST00000344726 ENO4A6NNW6 628 aa13.13□□□□□ -0.31
HMGN3-202ENST00000344726 IFI6P09912 130 aa13.13□□□□□ -0.31
HMGN3-202ENST00000344726 BMP7P18075 431 aa13.13□□□□□ -0.31
HMGN3-202ENST00000344726 IL12BP29460 328 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms