RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 ZNF140P52738 457 aaPredicted RBP7.67□□□□□ -1.18
ATG4A-201ENST00000343524 DSC2Q02487 901 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 DSC1Q08554 894 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 HTR4Q13639 388 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 VGLL4Q14135 290 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 TRAM2Q15035 370 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 RGNQ15493 299 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 ZBTB6Q15916 424 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 GUCA2BQ16661 112 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 EIF2S3LQ2VIR3 472 aaKnown RBP7.67□□□□□ -1.18
ATG4A-201ENST00000343524 C9orf50Q5SZB4 431 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 GCNT6Q5T4J0 391 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 PRAMEF13Q5VWM6 474 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 SLC6A19Q695T7 634 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 LRRN1Q6UXK5 716 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 SLC36A4Q6YBV0 504 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 USP53Q70EK8 1073 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 RHOUQ7L0Q8 258 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 FAM122BQ7Z309 247 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 TSEN54Q7Z6J9 526 aaKnown RBP7.67□□□□□ -1.18
ATG4A-201ENST00000343524 PLEKHH3Q7Z736 793 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 TPRA1Q86W33 373 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 TMEM130Q8N3G9 435 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 CPXM2Q8N436 756 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 OXR1Q8N573 874 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 MEIOBQ8N635 442 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 ARIH2OSQ8N7S6 290 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 ZNF527Q8NB42 609 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 OR6K3Q8NGY3 331 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 GNPDA2Q8TDQ7 276 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 SMAP2Q8WU79 429 aaPredicted RBP7.67□□□□□ -1.18
ATG4A-201ENST00000343524 ZFPM2Q8WW38 1151 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 SELENOMQ8WWX9 145 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 CNOT9Q92600 299 aaKnown RBP7.67□□□□□ -1.18
ATG4A-201ENST00000343524 ATG4CQ96DT6 458 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 RNFT2Q96EX2 444 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 PHYHIPLQ96FC7 376 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 OR2A7Q96R45 310 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 TCF25Q9BQ70 676 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 DPH2Q9BQC3 489 aaPredicted RBP7.67□□□□□ -1.18
ATG4A-201ENST00000343524 PAPOLGQ9BWT3 736 aaKnown RBP7.67□□□□□ -1.18
ATG4A-201ENST00000343524 ACPTQ9BZG2 426 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 ARL6Q9H0F7 186 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 SLC38A1Q9H2H9 487 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 RERGLQ9H628 205 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 OPA3Q9H6K4 179 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 WDR26Q9H7D7 661 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 C1GALT1Q9NS00 363 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 ACER3Q9NUN7 267 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 TMEM184CQ9NVA4 438 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 TEX10Q9NXF1 929 aaPredicted RBP7.67□□□□□ -1.18
ATG4A-201ENST00000343524 OR6C2Q9NZP2 312 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 KCND3Q9UK17 655 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 ANGPT4Q9Y264 503 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 SLC9A8Q9Y2E8 581 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 SNX10Q9Y5X0 201 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 ARL5AQ9Y689 179 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 UBE2QL1A1L167 161 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 PIRO00625 290 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 UBE2CO00762 179 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 IRAK2O43187 625 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 PRODHO43272 600 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 ZDHHC11BP0C7U3 371 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 SPP1P10451 314 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 POU2F1P14859 743 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 RPA2P15927 270 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 LMO2P25791 158 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 PAX6P26367 422 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 MNDAP41218 407 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 ASMTP46597 345 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 FNTBP49356 437 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 CAV3P56539 151 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 PSMA6P60900 246 aaKnown RBP7.66□□□□□ -1.18
ATG4A-201ENST00000343524 MBTPS1Q14703 1052 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 ZNF630Q2M218 657 aaPredicted RBP7.66□□□□□ -1.18
ATG4A-201ENST00000343524 SLC36A2Q495M3 483 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 MINDY4Q4G0A6 757 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 SYTL3Q4VX76 610 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 IDNKQ5T6J7 187 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 GPRC6AQ5T6X5 926 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 VASNQ6EMK4 673 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 ALG1LQ6GMV1 187 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 SBSNQ6UWP8 590 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 GPR135Q8IZ08 494 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 UMODL1-AS1Q8N2C9 162 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 SLC44A3Q8N4M1 653 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 KLHL36Q8N4N3 616 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 REPS2Q8NFH8 660 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 MDGA1Q8NFP4 955 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 OR13C4Q8NGS5 318 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 RNASE11Q8TAA1 199 aaKnown RBP7.66□□□□□ -1.18
ATG4A-201ENST00000343524 HSD17B8Q92506 261 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 SENP5Q96HI0 755 aaPredicted RBP7.66□□□□□ -1.18
ATG4A-201ENST00000343524 FUBP3Q96I24 572 aaKnown RBP eCLIP7.66□□□□□ -1.18
ATG4A-201ENST00000343524 C12orf66Q96MD2 445 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 SLC6A18Q96N87 628 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 CRB3Q9BUF7 120 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 FAIM2Q9BWQ8 316 aa7.66□□□□□ -1.18
ATG4A-201ENST00000343524 SORBS1Q9BX66 1292 aaKnown RBP7.66□□□□□ -1.18
ATG4A-201ENST00000343524 ENKD1Q9H0I2 346 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms