RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 MARCH9Q86YJ5 346 aa6.82□□□□□ -1.32
PTPRR-202ENST00000342084 OR4N5Q8IXE1 308 aa6.82□□□□□ -1.32
PTPRR-202ENST00000342084 FAM181AQ8N9Y4 354 aa6.82□□□□□ -1.32
PTPRR-202ENST00000342084 TMEM145Q8NBT3 493 aa6.82□□□□□ -1.32
PTPRR-202ENST00000342084 NUP43Q8NFH3 380 aa6.82□□□□□ -1.32
PTPRR-202ENST00000342084 OR52E1Q8NGJ3 308 aa6.82□□□□□ -1.32
PTPRR-202ENST00000342084 SETD6Q8TBK2 473 aa6.82□□□□□ -1.32
PTPRR-202ENST00000342084 TMEM255BQ8WV15 326 aa6.82□□□□□ -1.32
PTPRR-202ENST00000342084 UFD1Q92890 307 aa6.82□□□□□ -1.32
PTPRR-202ENST00000342084 MS4A6EQ96DS6 147 aa6.82□□□□□ -1.32
PTPRR-202ENST00000342084 MSLNLQ96KJ4 702 aa6.82□□□□□ -1.32
PTPRR-202ENST00000342084 ART5Q96L15 291 aa6.82□□□□□ -1.32
PTPRR-202ENST00000342084 NECTIN4Q96NY8 510 aa6.82□□□□□ -1.32
PTPRR-202ENST00000342084 TBX5Q99593 518 aa6.82□□□□□ -1.32
PTPRR-202ENST00000342084 SMAD5Q99717 465 aaKnown RBP6.82□□□□□ -1.32
PTPRR-202ENST00000342084 SLC6A17Q9H1V8 727 aa6.82□□□□□ -1.32
PTPRR-202ENST00000342084 SLC38A1Q9H2H9 487 aa6.82□□□□□ -1.32
PTPRR-202ENST00000342084 MED20Q9H944 212 aa6.82□□□□□ -1.32
PTPRR-202ENST00000342084 MOV10Q9HCE1 1003 aaKnown RBP6.82□□□□□ -1.32
PTPRR-202ENST00000342084 PRDM7Q9NQW5 492 aa6.82□□□□□ -1.32
PTPRR-202ENST00000342084 APOBEC3BQ9UH17 382 aaKnown RBP6.82□□□□□ -1.32
PTPRR-202ENST00000342084 CLCA2Q9UQC9 943 aa6.82□□□□□ -1.32
PTPRR-202ENST00000342084 GRIP1Q9Y3R0 1128 aa6.82□□□□□ -1.32
PTPRR-202ENST00000342084 CSNK1G3Q9Y6M4 447 aa6.82□□□□□ -1.32
PTPRR-202ENST00000342084 HEATR5BQ9P2D3 2071 aa6.82□□□□□ -1.32
PTPRR-202ENST00000342084 RANBP2P49792 3224 aaKnown RBP6.82□□□□□ -1.32
PTPRR-202ENST00000342084 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.81□□□□□ -1.32
PTPRR-202ENST00000342084 A0A1W2PP55 124 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 SYNDIG1LA6NDD5 238 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 CCDC182A6NF36 153 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 TTC36A6NLP5 189 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 SLC30A4O14863 429 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 POLR1CO15160 346 aaPredicted RBP6.81□□□□□ -1.32
PTPRR-202ENST00000342084 DNAJB6O75190 326 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 CLEC3AO75596 197 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 RPN2P04844 631 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 ALPPP05187 535 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 ACADMP11310 421 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 DDX5P17844 614 aaKnown RBP6.81□□□□□ -1.32
PTPRR-202ENST00000342084 MYL9P24844 172 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 ATP5A1P25705 553 aaKnown RBP6.81□□□□□ -1.32
PTPRR-202ENST00000342084 PKLRP30613 574 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 MAT2AP31153 395 aaKnown RBP6.81□□□□□ -1.32
PTPRR-202ENST00000342084 SLC1A3P43003 542 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 OMPP47874 163 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 SLC9A3P48764 834 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 CDH11P55287 796 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 BNC1Q01954 994 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 COX10Q12887 443 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 ZNF155Q12901 538 aaPredicted RBP6.81□□□□□ -1.32
PTPRR-202ENST00000342084 MLC1Q15049 377 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 ZIC1Q15915 447 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 MINDY4Q4G0A6 757 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 KLHL22Q53GT1 634 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 Q5BKY6 102 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 CCNJQ5T5M9 372 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 DDI2Q5TDH0 399 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 AGBL4Q5VU57 503 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 RNLSQ5VYX0 342 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 ABHD17CQ6PCB6 329 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 CNIH2Q6PI25 160 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 IL20RBQ6UXL0 311 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 CD300LDQ6UXZ3 194 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 HSDL2Q6YN16 418 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 ADGRD2Q7Z7M1 963 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 GALNT12Q8IXK2 581 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 NRMQ8IXM6 262 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 NATD1Q8N6N6 113 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 CLDN22Q8N7P3 220 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 KCT2Q8NC54 265 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 GNPDA2Q8TDQ7 276 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 SMAP2Q8WU79 429 aaPredicted RBP6.81□□□□□ -1.32
PTPRR-202ENST00000342084 SPRYD4Q8WW59 207 aaPredicted RBP6.81□□□□□ -1.32
PTPRR-202ENST00000342084 SMG7Q92540 1137 aaKnown RBP6.81□□□□□ -1.32
PTPRR-202ENST00000342084 DIO2Q92813 273 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 COL26A1Q96A83 441 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 SENP5Q96HI0 755 aaPredicted RBP6.81□□□□□ -1.32
PTPRR-202ENST00000342084 FAIM2Q9BWQ8 316 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 PINK1Q9BXM7 581 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 SLC22A4Q9H015 551 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 WDR26Q9H7D7 661 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 ISG20L2Q9H9L3 353 aaKnown RBP6.81□□□□□ -1.32
PTPRR-202ENST00000342084 MRPS30Q9NP92 439 aaKnown RBP6.81□□□□□ -1.32
PTPRR-202ENST00000342084 FGF20Q9NP95 211 aaPredicted RBP6.81□□□□□ -1.32
PTPRR-202ENST00000342084 TMEM74BQ9NUR3 256 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 PAQR5Q9NXK6 330 aaPredicted RBP6.81□□□□□ -1.32
PTPRR-202ENST00000342084 NPAP1Q9NZP6 1156 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 ITGB1BP2Q9UKP3 347 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 ZFR2Q9UPR6 939 aaKnown RBP6.81□□□□□ -1.32
PTPRR-202ENST00000342084 ENTPD4Q9Y227 616 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.81□□□□□ -1.32
PTPRR-202ENST00000342084 GPSM3Q9Y4H4 160 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 SNRNP200O75643 2136 aaKnown RBP6.81□□□□□ -1.32
PTPRR-202ENST00000342084 TRBV23OR9-2A0A075B6M9 112 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 NPIPA5A0A0B4J1W7 369 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 A0A0G2JPF8 293 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 HMX3A6NHT5 357 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 KDM4EB2RXH2 506 aaPredicted RBP6.81□□□□□ -1.32
PTPRR-202ENST00000342084 HNRNPCL2B2RXH8 293 aa6.81□□□□□ -1.32
PTPRR-202ENST00000342084 HNRNPCL3B7ZW38 293 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms