RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 STX11O75558 287 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 DKK1O94907 266 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 IFNW1P05000 195 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 FESP07332 822 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 ATP6V1C1P21283 382 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 MAGEA2P43356 314 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 EMP2P54851 167 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 AQP4P55087 323 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 FOXL2P58012 376 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 SFT2D3Q587I9 215 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 OR2T5Q6IEZ7 315 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 KBTBD2Q8IY47 623 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 CBR4Q8N4T8 237 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 OR2T29Q8NH02 315 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 C16orf52Q8NHV5 167 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 SLC2A12Q8TD20 617 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 PMEPA1Q969W9 287 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 RMND5BQ96G75 393 aaPredicted RBP16.12■□□□□ 0.17
CLDN4-201ENST00000340958 ZNF570Q96NI8 536 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 CRB3Q9BUF7 120 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 C3orf18Q9UK00 162 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 ZNF232Q9UNY5 417 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 CFL2Q9Y281 166 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 PADI2Q9Y2J8 665 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 U3KQV3 271 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 CEP295Q9C0D2 2601 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 WDFY3Q8IZQ1 3526 aa16.11■□□□□ 0.17
CLDN4-201ENST00000340958 G3V2T6 193 aa16.11■□□□□ 0.17
CLDN4-201ENST00000340958 FCMRO60667 390 aa16.11■□□□□ 0.17
CLDN4-201ENST00000340958 RECKO95980 971 aa16.11■□□□□ 0.17
CLDN4-201ENST00000340958 ALBP02768 609 aa16.11■□□□□ 0.17
CLDN4-201ENST00000340958 SEMG1P04279 462 aa16.11■□□□□ 0.17
CLDN4-201ENST00000340958 KCNJ5P48544 419 aa16.11■□□□□ 0.17
CLDN4-201ENST00000340958 KCNC4Q03721 635 aa16.11■□□□□ 0.17
CLDN4-201ENST00000340958 OTUD3Q5T2D3 398 aaPredicted RBP16.11■□□□□ 0.17
CLDN4-201ENST00000340958 ZNF385CQ66K41 422 aaPredicted RBP16.11■□□□□ 0.17
CLDN4-201ENST00000340958 LCN10Q6JVE6 187 aa16.11■□□□□ 0.17
CLDN4-201ENST00000340958 LANCL3Q6ZV70 420 aa16.11■□□□□ 0.17
CLDN4-201ENST00000340958 PEX5LQ8IYB4 626 aa16.11■□□□□ 0.17
CLDN4-201ENST00000340958 VANGL1Q8TAA9 524 aaPredicted RBP16.11■□□□□ 0.17
CLDN4-201ENST00000340958 FKBP10Q96AY3 582 aa16.11■□□□□ 0.17
CLDN4-201ENST00000340958 FBXL20Q96IG2 436 aa16.11■□□□□ 0.17
CLDN4-201ENST00000340958 ZNF354BQ96LW1 612 aa16.11■□□□□ 0.17
CLDN4-201ENST00000340958 ZNF347Q96SE7 839 aa16.11■□□□□ 0.17
CLDN4-201ENST00000340958 SDF2Q99470 211 aa16.11■□□□□ 0.17
CLDN4-201ENST00000340958 ZPBPQ9BS86 351 aa16.11■□□□□ 0.17
CLDN4-201ENST00000340958 LMF2Q9BU23 707 aaKnown RBP16.11■□□□□ 0.17
CLDN4-201ENST00000340958 SLC38A1Q9H2H9 487 aa16.11■□□□□ 0.17
CLDN4-201ENST00000340958 REEP1Q9H902 201 aa16.11■□□□□ 0.17
CLDN4-201ENST00000340958 MTHFD2LQ9H903 347 aaPredicted RBP16.11■□□□□ 0.17
CLDN4-201ENST00000340958 BATF3Q9NR55 127 aa16.11■□□□□ 0.17
CLDN4-201ENST00000340958 SATB2Q9UPW6 733 aa16.11■□□□□ 0.17
CLDN4-201ENST00000340958 B3GALT1Q9Y5Z6 326 aa16.11■□□□□ 0.17
CLDN4-201ENST00000340958 AKAP13Q12802 2813 aa16.11■□□□□ 0.17
CLDN4-201ENST00000340958 ALOX12BO75342 701 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 NKX2-2O95096 273 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 PABPC4LP0CB38 370 aaKnown RBP16.1■□□□□ 0.17
CLDN4-201ENST00000340958 CDK4P11802 303 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 SLC5A2P31639 672 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 YAP1P46937 504 aaKnown RBP16.1■□□□□ 0.17
CLDN4-201ENST00000340958 NNATQ16517 81 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 HES3Q5TGS1 186 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 CDCP2Q5VXM1 449 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 HLA-DQA1Q5Y7H0 255 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 FAM199XQ6PEV8 388 aaPredicted RBP16.1■□□□□ 0.17
CLDN4-201ENST00000340958 PIWIL3Q7Z3Z3 882 aaKnown RBP16.1■□□□□ 0.17
CLDN4-201ENST00000340958 STK32CQ86UX6 486 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 GALNT6Q8NCL4 622 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 OR52P1PQ8NH57 321 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 LIN37Q96GY3 246 aaPredicted RBP16.1■□□□□ 0.17
CLDN4-201ENST00000340958 VSTM2LQ96N03 204 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 LRFN5Q96NI6 719 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 TAAR9Q96RI9 348 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 ITPAQ9BY32 194 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 CNOT11Q9UKZ1 510 aaKnown RBP16.1■□□□□ 0.17
CLDN4-201ENST00000340958 SLC9A8Q9Y2E8 581 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 LRRC42Q9Y546 428 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 GXYLT2A0PJZ3 443 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 TTC36A6NLP5 189 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 TMEM229AB2RXF0 380 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 SOCS2O14508 198 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 ONECUT2O95948 504 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 CCNYL3P0C7X3 344 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 IL7RP16871 459 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 SPINK2P20155 84 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 CD247P20963 164 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 PPP1R8Q12972 351 aaKnown RBP16.1■□□□□ 0.17
CLDN4-201ENST00000340958 LARS2Q15031 903 aaKnown RBP16.1■□□□□ 0.17
CLDN4-201ENST00000340958 TMEM164Q5U3C3 297 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 TYW3Q6IPR3 259 aaKnown RBP16.1■□□□□ 0.17
CLDN4-201ENST00000340958 CYP4Z1Q86W10 505 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 ZNF615Q8N8J6 731 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 CHDHQ8NE62 594 aaPredicted RBP16.1■□□□□ 0.17
CLDN4-201ENST00000340958 ADAMTS14Q8WXS8 1223 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 C7orf34Q96L11 122 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 SLC46A1Q96NT5 459 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 GAL3ST4Q96RP7 486 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 SLC29A1Q99808 456 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 NTN4Q9HB63 628 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 C8orf4Q9NR00 106 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms