RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 NUP214P35658 2090 aaPredicted RBP14.08□□□□□ -0.15
VAPA-201ENST00000340541 NCOA6Q14686 2063 aaPredicted RBP14.08□□□□□ -0.15
VAPA-201ENST00000340541 CSMD1Q96PZ7 3565 aa14.08□□□□□ -0.16
VAPA-201ENST00000340541 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.08□□□□□ -0.16
VAPA-201ENST00000340541 A0A1B0GVC2 190 aa14.08□□□□□ -0.16
VAPA-201ENST00000340541 SDHDO14521 159 aa14.08□□□□□ -0.16
VAPA-201ENST00000340541 ADAM10O14672 748 aa14.08□□□□□ -0.16
VAPA-201ENST00000340541 SNX4O95219 450 aa14.08□□□□□ -0.16
VAPA-201ENST00000340541 CLDN14O95500 239 aa14.08□□□□□ -0.16
VAPA-201ENST00000340541 ABOP16442 354 aa14.08□□□□□ -0.16
VAPA-201ENST00000340541 PRPS1L1P21108 318 aa14.08□□□□□ -0.16
VAPA-201ENST00000340541 PTGS2P35354 604 aa14.08□□□□□ -0.16
VAPA-201ENST00000340541 RPL3P39023 403 aaKnown RBP14.08□□□□□ -0.16
VAPA-201ENST00000340541 MANFP55145 182 aaKnown RBP14.08□□□□□ -0.16
VAPA-201ENST00000340541 CLDN8P56748 225 aa14.08□□□□□ -0.16
VAPA-201ENST00000340541 PSPHP78330 225 aa14.08□□□□□ -0.16
VAPA-201ENST00000340541 MAD2L1Q13257 205 aaPredicted RBP14.08□□□□□ -0.16
VAPA-201ENST00000340541 EXOSC6Q5RKV6 272 aaKnown RBP14.08□□□□□ -0.16
VAPA-201ENST00000340541 ARHGAP11AQ6P4F7 1023 aa14.08□□□□□ -0.16
VAPA-201ENST00000340541 LARP4Q71RC2 724 aaKnown RBP eCLIP14.08□□□□□ -0.16
VAPA-201ENST00000340541 TRILQ7L0X0 811 aa14.08□□□□□ -0.16
VAPA-201ENST00000340541 LRRC34Q8IZ02 419 aa14.08□□□□□ -0.16
VAPA-201ENST00000340541 FAM57AQ8TBR7 257 aa14.08□□□□□ -0.16
VAPA-201ENST00000340541 GIMAP5Q96F15 307 aa14.08□□□□□ -0.16
VAPA-201ENST00000340541 TMEM41AQ96HV5 264 aa14.08□□□□□ -0.16
VAPA-201ENST00000340541 ZNF597Q96LX8 424 aa14.08□□□□□ -0.16
VAPA-201ENST00000340541 COL21A1Q96P44 957 aa14.08□□□□□ -0.16
VAPA-201ENST00000340541 UBQLN3Q9H347 655 aa14.08□□□□□ -0.16
VAPA-201ENST00000340541 VIPAS39Q9H9C1 493 aa14.08□□□□□ -0.16
VAPA-201ENST00000340541 ARGLU1Q9NWB6 273 aaPredicted RBP14.08□□□□□ -0.16
VAPA-201ENST00000340541 FBN2P35556 2912 aa14.07□□□□□ -0.16
VAPA-201ENST00000340541 E9PLN8 166 aa14.07□□□□□ -0.16
VAPA-201ENST00000340541 KLF11O14901 512 aa14.07□□□□□ -0.16
VAPA-201ENST00000340541 ANKRD28O15084 1053 aa14.07□□□□□ -0.16
VAPA-201ENST00000340541 REM1O75628 298 aa14.07□□□□□ -0.16
VAPA-201ENST00000340541 SASH3O75995 380 aa14.07□□□□□ -0.16
VAPA-201ENST00000340541 CAPN3P20807 821 aa14.07□□□□□ -0.16
VAPA-201ENST00000340541 ENDOUP21128 410 aaKnown RBP14.07□□□□□ -0.16
VAPA-201ENST00000340541 SSTR2P30874 369 aa14.07□□□□□ -0.16
VAPA-201ENST00000340541 GPC1P35052 558 aa14.07□□□□□ -0.16
VAPA-201ENST00000340541 RPP38P78345 283 aaKnown RBP14.07□□□□□ -0.16
VAPA-201ENST00000340541 SNTA1Q13424 505 aa14.07□□□□□ -0.16
VAPA-201ENST00000340541 GAB1Q13480 694 aa14.07□□□□□ -0.16
VAPA-201ENST00000340541 EMC4Q5J8M3 183 aa14.07□□□□□ -0.16
VAPA-201ENST00000340541 CPTPQ5TA50 214 aa14.07□□□□□ -0.16
VAPA-201ENST00000340541 ATG16L1Q676U5 607 aa14.07□□□□□ -0.16
VAPA-201ENST00000340541 OGFOD2Q6N063 350 aa14.07□□□□□ -0.16
VAPA-201ENST00000340541 CAMKMTQ7Z624 323 aa14.07□□□□□ -0.16
VAPA-201ENST00000340541 TRIM42Q8IWZ5 723 aa14.07□□□□□ -0.16
VAPA-201ENST00000340541 PSMA8Q8TAA3 256 aa14.07□□□□□ -0.16
VAPA-201ENST00000340541 LURAP1Q96LR2 239 aa14.07□□□□□ -0.16
VAPA-201ENST00000340541 JSRP1Q96MG2 331 aaPredicted RBP14.07□□□□□ -0.16
VAPA-201ENST00000340541 ADOQ96SZ5 270 aa14.07□□□□□ -0.16
VAPA-201ENST00000340541 SPOCK3Q9BQ16 436 aa14.07□□□□□ -0.16
VAPA-201ENST00000340541 VKORC1Q9BQB6 163 aa14.07□□□□□ -0.16
VAPA-201ENST00000340541 GALNT9Q9HCQ5 603 aa14.07□□□□□ -0.16
VAPA-201ENST00000340541 QPCTLQ9NXS2 382 aa14.07□□□□□ -0.16
VAPA-201ENST00000340541 MARCOQ9UEW3 520 aaPredicted RBP14.07□□□□□ -0.16
VAPA-201ENST00000340541 PKDREJQ9NTG1 2253 aa14.07□□□□□ -0.16
VAPA-201ENST00000340541 A0A1W2PRB8 838 aa14.06□□□□□ -0.16
VAPA-201ENST00000340541 PRAMEF25A6NGN4 478 aa14.06□□□□□ -0.16
VAPA-201ENST00000340541 HAX1O00165 279 aa14.06□□□□□ -0.16
VAPA-201ENST00000340541 HDAC3O15379 428 aa14.06□□□□□ -0.16
VAPA-201ENST00000340541 SUSD5O60279 629 aa14.06□□□□□ -0.16
VAPA-201ENST00000340541 ICOSLGO75144 302 aa14.06□□□□□ -0.16
VAPA-201ENST00000340541 DDX5P17844 614 aaKnown RBP14.06□□□□□ -0.16
VAPA-201ENST00000340541 LBPP18428 481 aa14.06□□□□□ -0.16
VAPA-201ENST00000340541 POU3F2P20265 443 aaPredicted RBP14.06□□□□□ -0.16
VAPA-201ENST00000340541 PTPN6P29350 595 aa14.06□□□□□ -0.16
VAPA-201ENST00000340541 PNLIPRP2P54317 469 aa14.06□□□□□ -0.16
VAPA-201ENST00000340541 SLC10A1Q14973 349 aa14.06□□□□□ -0.16
VAPA-201ENST00000340541 CYP27C1Q4G0S4 372 aa14.06□□□□□ -0.16
VAPA-201ENST00000340541 TMEM198Q66K66 360 aa14.06□□□□□ -0.16
VAPA-201ENST00000340541 TIGD3Q6B0B8 471 aa14.06□□□□□ -0.16
VAPA-201ENST00000340541 SLC30A6Q6NXT4 461 aa14.06□□□□□ -0.16
VAPA-201ENST00000340541 PAOXQ6QHF9 649 aa14.06□□□□□ -0.16
VAPA-201ENST00000340541 MAVSQ7Z434 540 aa14.06□□□□□ -0.16
VAPA-201ENST00000340541 PACS2Q86VP3 889 aa14.06□□□□□ -0.16
VAPA-201ENST00000340541 WDR75Q8IWA0 830 aaKnown RBP14.06□□□□□ -0.16
VAPA-201ENST00000340541 ZNF75CPQ92670 426 aaPredicted RBP14.06□□□□□ -0.16
VAPA-201ENST00000340541 EFHD2Q96C19 240 aaPredicted RBP14.06□□□□□ -0.16
VAPA-201ENST00000340541 FAM120BQ96EK7 910 aaKnown RBP14.06□□□□□ -0.16
VAPA-201ENST00000340541 GNRHR2Q96P88 292 aa14.06□□□□□ -0.16
VAPA-201ENST00000340541 MS4A4EQ96PG1 132 aa14.06□□□□□ -0.16
VAPA-201ENST00000340541 OSBPL11Q9BXB4 747 aa14.06□□□□□ -0.16
VAPA-201ENST00000340541 TRIM8Q9BZR9 551 aa14.06□□□□□ -0.16
VAPA-201ENST00000340541 BHLHE41Q9C0J9 482 aaPredicted RBP14.06□□□□□ -0.16
VAPA-201ENST00000340541 METTL7AQ9H8H3 244 aa14.06□□□□□ -0.16
VAPA-201ENST00000340541 ACKR4Q9NPB9 350 aa14.06□□□□□ -0.16
VAPA-201ENST00000340541 EQTNQ9NQ60 294 aa14.06□□□□□ -0.16
VAPA-201ENST00000340541 C15orf41Q9Y2V0 281 aa14.06□□□□□ -0.16
VAPA-201ENST00000340541 OR10H1Q9Y4A9 318 aa14.06□□□□□ -0.16
VAPA-201ENST00000340541 DCHS2Q6V1P9 2916 aa14.06□□□□□ -0.16
VAPA-201ENST00000340541 TEP1Q99973 2627 aaKnown RBP14.05□□□□□ -0.16
VAPA-201ENST00000340541 GXYLT2A0PJZ3 443 aa14.05□□□□□ -0.16
VAPA-201ENST00000340541 C2orf72A6NCS6 295 aa14.05□□□□□ -0.16
VAPA-201ENST00000340541 OR14I1A6ND48 311 aa14.05□□□□□ -0.16
VAPA-201ENST00000340541 B4DXG7 233 aa14.05□□□□□ -0.16
VAPA-201ENST00000340541 AQP7O14520 342 aa14.05□□□□□ -0.16
VAPA-201ENST00000340541 ZNF195O14628 629 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms