RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 FIGNL2A6NMB9 653 aa13.34□□□□□ -0.27
ERCC1-203ENST00000340192 SNPHO15079 494 aa13.34□□□□□ -0.27
ERCC1-203ENST00000340192 SCAMP2O15127 329 aaKnown RBP13.34□□□□□ -0.27
ERCC1-203ENST00000340192 HPNP05981 417 aa13.34□□□□□ -0.27
ERCC1-203ENST00000340192 EFNA1P20827 205 aaPredicted RBP13.34□□□□□ -0.27
ERCC1-203ENST00000340192 BGNP21810 368 aa13.34□□□□□ -0.27
ERCC1-203ENST00000340192 SLC1A6P48664 564 aa13.34□□□□□ -0.27
ERCC1-203ENST00000340192 CDK9P50750 372 aaKnown RBP13.34□□□□□ -0.27
ERCC1-203ENST00000340192 PNLIPRP2P54317 469 aa13.34□□□□□ -0.27
ERCC1-203ENST00000340192 PMPCAQ10713 525 aa13.34□□□□□ -0.27
ERCC1-203ENST00000340192 EFR3AQ14156 821 aa13.34□□□□□ -0.27
ERCC1-203ENST00000340192 PTGR1Q14914 329 aa13.34□□□□□ -0.27
ERCC1-203ENST00000340192 TOMM20Q15388 145 aa13.34□□□□□ -0.27
ERCC1-203ENST00000340192 ZNHIT3Q15649 155 aaPredicted RBP13.34□□□□□ -0.27
ERCC1-203ENST00000340192 PDCD2Q16342 344 aaPredicted RBP13.34□□□□□ -0.27
ERCC1-203ENST00000340192 ZNF630Q2M218 657 aaPredicted RBP13.34□□□□□ -0.27
ERCC1-203ENST00000340192 CYP27C1Q4G0S4 372 aa13.34□□□□□ -0.27
ERCC1-203ENST00000340192 WLSQ5T9L3 541 aa13.34□□□□□ -0.27
ERCC1-203ENST00000340192 IL23RQ5VWK5 629 aa13.34□□□□□ -0.27
ERCC1-203ENST00000340192 R3HCC1LQ7Z5L2 792 aaKnown RBP13.34□□□□□ -0.27
ERCC1-203ENST00000340192 ANKRD42Q8N9B4 389 aa13.34□□□□□ -0.27
ERCC1-203ENST00000340192 OR7A2PQ8NGA2 310 aa13.34□□□□□ -0.27
ERCC1-203ENST00000340192 ZFP28Q8NHY6 868 aa13.34□□□□□ -0.27
ERCC1-203ENST00000340192 RND1Q92730 232 aa13.34□□□□□ -0.27
ERCC1-203ENST00000340192 SDCCAG3Q96C92 435 aa13.34□□□□□ -0.27
ERCC1-203ENST00000340192 PPP1R36Q96LQ0 422 aa13.34□□□□□ -0.27
ERCC1-203ENST00000340192 SORT1Q99523 831 aa13.34□□□□□ -0.27
ERCC1-203ENST00000340192 EQTNQ9NQ60 294 aa13.34□□□□□ -0.27
ERCC1-203ENST00000340192 ACSS1Q9NUB1 689 aaPredicted RBP13.34□□□□□ -0.27
ERCC1-203ENST00000340192 COQ3Q9NZJ6 369 aa13.34□□□□□ -0.27
ERCC1-203ENST00000340192 ATP6V1HQ9UI12 483 aa13.34□□□□□ -0.27
ERCC1-203ENST00000340192 CBLCQ9ULV8 474 aa13.34□□□□□ -0.27
ERCC1-203ENST00000340192 MAPRE3Q9UPY8 281 aa13.34□□□□□ -0.27
ERCC1-203ENST00000340192 RAP2CQ9Y3L5 183 aa13.34□□□□□ -0.27
ERCC1-203ENST00000340192 ITPR2Q14571 2701 aa13.33□□□□□ -0.27
ERCC1-203ENST00000340192 WDR1O75083 606 aa13.33□□□□□ -0.28
ERCC1-203ENST00000340192 SNUPNO95149 360 aaKnown RBP13.33□□□□□ -0.28
ERCC1-203ENST00000340192 PRPS2P11908 318 aa13.33□□□□□ -0.28
ERCC1-203ENST00000340192 CYP4B1P13584 511 aa13.33□□□□□ -0.28
ERCC1-203ENST00000340192 RPL3P39023 403 aaKnown RBP13.33□□□□□ -0.28
ERCC1-203ENST00000340192 RPL14P50914 215 aaKnown RBP13.33□□□□□ -0.28
ERCC1-203ENST00000340192 NUP107P57740 925 aa13.33□□□□□ -0.28
ERCC1-203ENST00000340192 MRPS22P82650 360 aaKnown RBP13.33□□□□□ -0.28
ERCC1-203ENST00000340192 STX3Q13277 289 aa13.33□□□□□ -0.28
ERCC1-203ENST00000340192 GAB1Q13480 694 aa13.33□□□□□ -0.28
ERCC1-203ENST00000340192 HHATQ5VTY9 493 aa13.33□□□□□ -0.28
ERCC1-203ENST00000340192 RTL6Q6ICC9 239 aa13.33□□□□□ -0.28
ERCC1-203ENST00000340192 ACAD11Q709F0 780 aa13.33□□□□□ -0.28
ERCC1-203ENST00000340192 WDSUB1Q8N9V3 476 aa13.33□□□□□ -0.28
ERCC1-203ENST00000340192 CA5BP1Q8WTZ4 195 aa13.33□□□□□ -0.28
ERCC1-203ENST00000340192 TTYH2Q9BSA4 534 aa13.33□□□□□ -0.28
ERCC1-203ENST00000340192 LMF2Q9BU23 707 aaKnown RBP13.33□□□□□ -0.28
ERCC1-203ENST00000340192 Q9N2J8 555 aa13.33□□□□□ -0.28
ERCC1-203ENST00000340192 CHST11Q9NPF2 352 aa13.33□□□□□ -0.28
ERCC1-203ENST00000340192 SERHLQ9NQF3 203 aa13.33□□□□□ -0.28
ERCC1-203ENST00000340192 ALKBH4Q9NXW9 302 aa13.33□□□□□ -0.28
ERCC1-203ENST00000340192 NTMQ9P121 344 aa13.33□□□□□ -0.28
ERCC1-203ENST00000340192 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.33□□□□□ -0.28
ERCC1-203ENST00000340192 SLC6A5Q9Y345 797 aa13.33□□□□□ -0.28
ERCC1-203ENST00000340192 FAM215AQ9Y5M1 114 aa13.33□□□□□ -0.28
ERCC1-203ENST00000340192 WIF1Q9Y5W5 379 aa13.33□□□□□ -0.28
ERCC1-203ENST00000340192 DCHS2Q6V1P9 2916 aa13.33□□□□□ -0.28
ERCC1-203ENST00000340192 TMEM120BA0PK00 339 aa13.32□□□□□ -0.28
ERCC1-203ENST00000340192 CBR3O75828 277 aa13.32□□□□□ -0.28
ERCC1-203ENST00000340192 LAMP1P11279 417 aa13.32□□□□□ -0.28
ERCC1-203ENST00000340192 DDX5P17844 614 aaKnown RBP13.32□□□□□ -0.28
ERCC1-203ENST00000340192 PRKAG1P54619 331 aa13.32□□□□□ -0.28
ERCC1-203ENST00000340192 WDR4P57081 412 aaKnown RBP13.32□□□□□ -0.28
ERCC1-203ENST00000340192 MAGOHP61326 146 aaKnown RBP13.32□□□□□ -0.28
ERCC1-203ENST00000340192 EMX2Q04743 252 aa13.32□□□□□ -0.28
ERCC1-203ENST00000340192 CRYZQ08257 329 aaKnown RBP13.32□□□□□ -0.28
ERCC1-203ENST00000340192 MAD2L1Q13257 205 aaPredicted RBP13.32□□□□□ -0.28
ERCC1-203ENST00000340192 DECR1Q16698 335 aa13.32□□□□□ -0.28
ERCC1-203ENST00000340192 EIPR1Q53HC9 387 aa13.32□□□□□ -0.28
ERCC1-203ENST00000340192 WIPI1Q5MNZ9 446 aaPredicted RBP13.32□□□□□ -0.28
ERCC1-203ENST00000340192 CPTPQ5TA50 214 aa13.32□□□□□ -0.28
ERCC1-203ENST00000340192 B3GNT6Q6ZMB0 384 aa13.32□□□□□ -0.28
ERCC1-203ENST00000340192 SZRD1Q7Z422 152 aa13.32□□□□□ -0.28
ERCC1-203ENST00000340192 KRTCAP2Q8N6L1 136 aa13.32□□□□□ -0.28
ERCC1-203ENST00000340192 FAM83FQ8NEG4 500 aaPredicted RBP13.32□□□□□ -0.28
ERCC1-203ENST00000340192 NUP43Q8NFH3 380 aa13.32□□□□□ -0.28
ERCC1-203ENST00000340192 NUDT8Q8WV74 236 aa13.32□□□□□ -0.28
ERCC1-203ENST00000340192 RNF138Q8WVD3 245 aa13.32□□□□□ -0.28
ERCC1-203ENST00000340192 MARVELD3Q96A59 401 aa13.32□□□□□ -0.28
ERCC1-203ENST00000340192 AKTIPQ9H8T0 292 aa13.32□□□□□ -0.28
ERCC1-203ENST00000340192 HAO1Q9UJM8 370 aa13.32□□□□□ -0.28
ERCC1-203ENST00000340192 RNF6Q9Y252 685 aa13.32□□□□□ -0.28
ERCC1-203ENST00000340192 EIF3LQ9Y262 564 aaKnown RBP13.32□□□□□ -0.28
ERCC1-203ENST00000340192 TEX15Q9BXT5 2789 aa13.32□□□□□ -0.28
ERCC1-203ENST00000340192 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.31□□□□□ -0.28
ERCC1-203ENST00000340192 TTC36A6NLP5 189 aa13.31□□□□□ -0.28
ERCC1-203ENST00000340192 C19orf84I3L1E1 186 aa13.31□□□□□ -0.28
ERCC1-203ENST00000340192 HNRNPRO43390 633 aaKnown RBP13.31□□□□□ -0.28
ERCC1-203ENST00000340192 EMC8O43402 210 aa13.31□□□□□ -0.28
ERCC1-203ENST00000340192 IL33O95760 270 aa13.31□□□□□ -0.28
ERCC1-203ENST00000340192 GLI4P10075 376 aa13.31□□□□□ -0.28
ERCC1-203ENST00000340192 G6PDP11413 515 aa13.31□□□□□ -0.28
ERCC1-203ENST00000340192 GABRA1P14867 456 aa13.31□□□□□ -0.28
ERCC1-203ENST00000340192 PRPS1L1P21108 318 aa13.31□□□□□ -0.28
ERCC1-203ENST00000340192 CHRNB4P30926 498 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms