RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 NUDT8Q8WV74 236 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 INTS12Q96CB8 462 aaKnown RBP12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 GATA5Q9BWX5 397 aaPredicted RBP12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 POLDIP3Q9BY77 421 aaKnown RBP12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 CALHM2Q9HA72 323 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 CCM2LQ9NUG4 571 aaPredicted RBP12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 RYDENQ9NUL5 291 aaKnown RBP12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 GIMAP4Q9NUV9 329 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 OXSMQ9NWU1 459 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 ZNF629Q9UEG4 869 aaPredicted RBP12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 BAIAP2L1Q9UHR4 511 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 GRID1Q9ULK0 1009 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 ANKRD17O75179 2603 aaKnown RBP12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 MBD3L4A6NDZ8 208 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 MBD3L3A6NE82 208 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 MBD3L5A6NJ08 208 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 CLCA1A8K7I4 914 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 FAM47E-STBD1D6RA91 191 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 AKAP10O43572 662 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 GMFGO60234 142 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 FADS1O60427 444 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 CRCPO75575 148 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 TGM6O95932 706 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 ACTL6AO96019 429 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 IGKV1D-16P01601 117 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 TMIGD3P0DMS9 266 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 CPN1P15169 458 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 EFNA1P20827 205 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 GRK2P25098 689 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 IL12BP29460 328 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 RFX3P48380 749 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 LHX2P50458 406 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 ASCL1P50553 236 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 DGKQP52824 942 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 PNLIPRP2P54317 469 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 CLDN15P56746 228 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 B3GALT5-AS1P59052 145 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 DNAJB13P59910 316 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 ZNF763Q0D2J5 394 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 ZNF155Q12901 538 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 STX5Q13190 355 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 ZNF385BQ569K4 471 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 CFAP157Q5JU67 520 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 FRMD7Q6ZUT3 714 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 GALNT10Q86SR1 603 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 LUZP2Q86TE4 346 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 MARCH3Q86UD3 253 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 EXOC3L1Q86VI1 746 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 GCNT2Q8N0V5 402 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 OR2T11Q8NH01 316 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 CLHC1Q8NHS4 586 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 MBD3L2Q8NHZ7 208 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 CIDECQ96AQ7 238 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 ELP4Q96EB1 424 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 AMDHD1Q96NU7 426 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 TUBB1Q9H4B7 451 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 RASSF1Q9NS23 344 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 GIMAP2Q9UG22 337 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 CBLCQ9ULV8 474 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 C19orf53Q9UNZ5 99 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 OR10H1Q9Y4A9 318 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 WIF1Q9Y5W5 379 aa12.12□□□□□ -0.47
NUDCD3-201ENST00000338427 MED12LQ86YW9 2145 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 FAM221AA4D161 298 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 SHISA8B8ZZ34 492 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 EEF1E1-BLOC1S5C9J1V9 151 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 H0Y3Z8 333 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 PLOD2O00469 737 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 COPEO14579 308 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 EEF1E1O43324 174 aaKnown RBP12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 CDH16O75309 829 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 LINC00032P0C843 101 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 KRT4P19013 534 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 DPP4P27487 766 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 SRD5A2P31213 254 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 KRT20P35900 424 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 CCT5P48643 541 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 CLDN18P56856 261 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 SLC18A2Q05940 514 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 EFR3AQ14156 821 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 APOOLQ6UXV4 268 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 SPNS3Q6ZMD2 512 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 CDC20BQ86Y33 519 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 UBQLNLQ8IYU4 475 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 DUSP19Q8WTR2 217 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 RNF138Q8WVD3 245 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 CCDC126Q96EE4 140 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 SFXN2Q96NB2 322 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 MYNNQ9NPC7 610 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 MIEF1Q9NQG6 463 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 TAS2R9Q9NYW1 312 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 TAS2R7Q9NYW3 318 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 JKAMPQ9P055 326 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 SENP1Q9P0U3 644 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 STK38LQ9Y2H1 464 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 PLEKHA6Q9Y2H5 1048 aa12.11□□□□□ -0.47
NUDCD3-201ENST00000338427 MAP1AP78559 2803 aaPredicted RBP12.1□□□□□ -0.47
NUDCD3-201ENST00000338427 CCDC151A5D8V7 595 aa12.1□□□□□ -0.47
NUDCD3-201ENST00000338427 A6NNC1 897 aa12.1□□□□□ -0.47
NUDCD3-201ENST00000338427 TMEM233B4DJY2 109 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms