RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 CHMP24386 653 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 CA5AP35218 305 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 GIPRP48546 466 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 C18orf63Q68DL7 685 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 GID4Q8IVV7 300 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 TMEFF1Q8IYR6 380 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 PROKR2Q8NFJ6 384 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 SLC22A31A6NKX4 558 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 RCVRNP35243 200 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 FAM109BQ6ICB4 259 aaPredicted RBP5.93□□□□□ -1.46
PRKDC-202ENST00000338368 KLBQ86Z14 1044 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 TANKQ92844 425 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 CDS1Q92903 461 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 DAZLQ92904 295 aaKnown RBP5.93□□□□□ -1.46
PRKDC-202ENST00000338368 FKBP10Q96AY3 582 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 CNDP2Q96KP4 475 aaKnown RBP5.93□□□□□ -1.46
PRKDC-202ENST00000338368 PRRC1Q96M27 445 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 BCL7BQ9BQE9 202 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 COMMD4Q9H0A8 199 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 QRSL1Q9H0R6 528 aaKnown RBP5.93□□□□□ -1.46
PRKDC-202ENST00000338368 EPHA6Q9UF33 1036 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 IL20RAQ9UHF4 553 aa5.93□□□□□ -1.46
PRKDC-202ENST00000338368 MYLKQ15746 1914 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 MRPL3P09001 348 aaKnown RBP5.92□□□□□ -1.46
PRKDC-202ENST00000338368 CPMP14384 443 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 ACPPP15309 386 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 UGT2B7P16662 529 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 BMXP51813 675 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 ISL1P61371 349 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 SLC3A1Q07837 685 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 CDKN3Q16667 212 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 C22orf42Q6IC83 251 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 SLC48A1Q6P1K1 146 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 RIMKLAQ8IXN7 391 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 VWA5B2Q8N398 1253 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 ACOT11Q8WXI4 607 aaPredicted RBP5.92□□□□□ -1.46
PRKDC-202ENST00000338368 NIPSNAP1Q9BPW8 284 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 DPH1Q9BZG8 443 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 SAP130Q9H0E3 1048 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 GLIPR2Q9H4G4 154 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 PRAMEF33A0A0G2JMD5 474 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 PRAMEF10O60809 474 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 ATE1O95260 518 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 CD2P06729 351 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 CBLP22681 906 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 CBX3Q13185 183 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 NKG7Q16617 165 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 PIP5KL1Q5T9C9 394 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 ADAMTS18Q8TE60 1221 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 ELP4Q96EB1 424 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 SLC6A13Q9NSD5 602 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 MBD1Q9UIS9 605 aaPredicted RBP5.92□□□□□ -1.46
PRKDC-202ENST00000338368 PLCL2Q9UPR0 1127 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.92□□□□□ -1.46
PRKDC-202ENST00000338368 A0A1B0GTW7 788 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 ANKRD28O15084 1053 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 PPM1DO15297 605 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 ITGA10O75578 1167 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 RPP14O95059 124 aaKnown RBP5.92□□□□□ -1.46
PRKDC-202ENST00000338368 CEACAM5P06731 702 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 TDGQ13569 410 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 SF3B4Q15427 424 aaKnown RBP eCLIP5.92□□□□□ -1.462e-6■■■■□ 24.3
PRKDC-202ENST00000338368 CCNJQ5T5M9 372 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 PHF19Q5T6S3 580 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 PODNL1Q6PEZ8 512 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 OLIG3Q7RTU3 272 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 RASGRP3Q8IV61 690 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 IL17RCQ8NAC3 791 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 TOR1AIP2Q8NFQ8 470 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 OR6C4Q8NGE1 309 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 COQ8BQ96D53 544 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 ALOXE3Q9BYJ1 711 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 CNIH4Q9P003 139 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 GRHPRQ9UBQ7 328 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 CSNK1G3Q9Y6M4 447 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 A0A1W2PRQ8 180 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 SLC16A6O15403 523 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 TMPRSS11DO60235 418 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 MOSPD3O75425 235 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 MT-ND5P03915 603 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 ZNF45Q02386 682 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 RNF165Q6ZSG1 346 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 POLDIP3Q9BY77 421 aaKnown RBP5.92□□□□□ -1.46
PRKDC-202ENST00000338368 SPNS1Q9H2V7 528 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 DSN1Q9H410 356 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 PCDHGA4Q9Y5G9 962 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 GPC6Q9Y625 555 aaPredicted RBP5.92□□□□□ -1.46
PRKDC-202ENST00000338368 C12orf71A8MTZ7 269 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 WWP2O00308 870 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 IDH3BO43837 385 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 SRPX2O60687 465 aaPredicted RBP5.92□□□□□ -1.46
PRKDC-202ENST00000338368 AHSA1O95433 338 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 PKLRP30613 574 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 ALG10BQ5I7T1 473 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 KLHL24Q6TFL4 600 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 PAMR1Q6UXH9 720 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 ANKRD13BQ86YJ7 626 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 MFSD9Q8NBP5 474 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 TMEM239Q8WW34 195 aa5.92□□□□□ -1.46
PRKDC-202ENST00000338368 HDHD5Q9BXW7 423 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms