RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 ALOX12BO75342 701 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 E2F6O75461 281 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 STX11O75558 287 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 DDAH2O95865 285 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 SLC5A2P31639 672 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 YAP1P46937 504 aaKnown RBP13.64□□□□□ -0.23
CBX3-201ENST00000337620 SLC37A1P57057 533 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 GPR68Q15743 365 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 NNATQ16517 81 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 ZNF311Q5JNZ3 666 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 OR2T5Q6IEZ7 315 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 TYW3Q6IPR3 259 aaKnown RBP13.64□□□□□ -0.23
CBX3-201ENST00000337620 MRPL14Q6P1L8 145 aaKnown RBP13.64□□□□□ -0.23
CBX3-201ENST00000337620 PIWIL3Q7Z3Z3 882 aaKnown RBP13.64□□□□□ -0.23
CBX3-201ENST00000337620 EPHX4Q8IUS5 362 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 CBR4Q8N4T8 237 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 CHDHQ8NE62 594 aaPredicted RBP13.64□□□□□ -0.23
CBX3-201ENST00000337620 OR4N2Q8NGD1 307 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 OR2T29Q8NH02 315 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 FKBP10Q96AY3 582 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 LRFN5Q96NI6 719 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 TAAR9Q96RI9 348 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 SPSB2Q99619 263 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 CRB3Q9BUF7 120 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 ITPAQ9BY32 194 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 SLC26A1Q9H2B4 701 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 MTHFD2LQ9H903 347 aaPredicted RBP13.64□□□□□ -0.23
CBX3-201ENST00000337620 FBXO34Q9NWN3 711 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 SATB2Q9UPW6 733 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 LRRC42Q9Y546 428 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 ZFHX2Q9C0A1 2572 aaPredicted RBP13.64□□□□□ -0.23
CBX3-201ENST00000337620 SOX30O94993 753 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 PRSS23O95084 383 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 ZNF26P17031 533 aaPredicted RBP13.64□□□□□ -0.23
CBX3-201ENST00000337620 PUM1Q14671 1186 aaKnown RBP eCLIP13.64□□□□□ -0.236e-15■□□□□ 9.6
CBX3-201ENST00000337620 ANKRD37Q7Z713 158 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 GLRX5Q86SX6 157 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 VRK2Q86Y07 508 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 ZNF721Q8TF20 911 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 HOXB13Q92826 284 aaPredicted RBP13.64□□□□□ -0.23
CBX3-201ENST00000337620 ZNF354BQ96LW1 612 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 MESP1Q9BRJ9 268 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 AMBRA1Q9C0C7 1298 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 Q9N2J8 555 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 NDUFAF4Q9P032 175 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 DSPPQ9NZW4 1301 aa13.64□□□□□ -0.23
CBX3-201ENST00000337620 CCDC187A0A096LP49 1063 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 SYNDIG1LA6NDD5 238 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 C9J4A7 227 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 PLD2O14939 933 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 ACOX3O15254 700 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 PRKNO60260 465 aaPredicted RBP13.63□□□□□ -0.23
CBX3-201ENST00000337620 STK17BO94768 372 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 KCNK2O95069 426 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 AK1P00568 194 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 IGKV3-11P04433 115 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 IFNW1P05000 195 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 PABPC4LP0CB38 370 aaKnown RBP13.63□□□□□ -0.23
CBX3-201ENST00000337620 ITGA2P17301 1181 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 TAF11Q15544 211 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 IQCCQ4KMZ1 466 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 OTUD3Q5T2D3 398 aaPredicted RBP13.63□□□□□ -0.23
CBX3-201ENST00000337620 FAM69BQ5VUD6 431 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 NPSR1Q6W5P4 371 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 TSEN54Q7Z6J9 526 aaKnown RBP13.63□□□□□ -0.23
CBX3-201ENST00000337620 OR52P1PQ8NH57 321 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 VANGL1Q8TAA9 524 aaPredicted RBP13.63□□□□□ -0.23
CBX3-201ENST00000337620 ART5Q96L15 291 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 SLC46A1Q96NT5 459 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 ZPBPQ9BS86 351 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 NUDT9Q9BW91 350 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 ZNF350Q9GZX5 532 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 CACYBPQ9HB71 228 aaKnown RBP13.63□□□□□ -0.23
CBX3-201ENST00000337620 COPS7AQ9UBW8 275 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 OR10H1Q9Y4A9 318 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 MAGED1Q9Y5V3 778 aaPredicted RBP13.63□□□□□ -0.23
CBX3-201ENST00000337620 SPAARA0A1B0GVQ0 90 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 G3V2T6 193 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 CT45A8P0DMV1 189 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 CT45A9P0DMV2 189 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 KCNC4Q03721 635 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 CT45A2Q5DJT8 189 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 PPP4R4Q6NUP7 873 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 TBPL2Q6SJ96 375 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 STK32CQ86UX6 486 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 CARM1Q86X55 608 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 ZDHHC13Q8IUH4 622 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 PEX5LQ8IYB4 626 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 ZNF300Q96RE9 604 aaPredicted RBP13.63□□□□□ -0.23
CBX3-201ENST00000337620 PINK1Q9BXM7 581 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 TRIM45Q9H8W5 580 aaPredicted RBP13.63□□□□□ -0.23
CBX3-201ENST00000337620 THSD1Q9NS62 852 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 VNN3Q9NY84 501 aa13.63□□□□□ -0.23
CBX3-201ENST00000337620 CNOT11Q9UKZ1 510 aaKnown RBP13.63□□□□□ -0.23
CBX3-201ENST00000337620 FAM32AQ9Y421 112 aaKnown RBP13.63□□□□□ -0.23
CBX3-201ENST00000337620 NINQ8N4C6 2090 aa13.62□□□□□ -0.23
CBX3-201ENST00000337620 NPIPA5A0A0B4J1W7 369 aa13.62□□□□□ -0.23
CBX3-201ENST00000337620 NPIPA7E9PJI5 369 aa13.62□□□□□ -0.23
CBX3-201ENST00000337620 J3KTA2 159 aa13.62□□□□□ -0.23
CBX3-201ENST00000337620 NPIPA8P0DM63 369 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms