RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 DCST1Q5T197 706 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 OR5M10Q6IEU7 315 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 P4HA3Q7Z4N8 544 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 CAMKMTQ7Z624 323 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 SLC44A2Q8IWA5 706 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-202ENST00000337571 FAM9CQ8IZT9 166 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 CEP112Q8N8E3 955 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 CDC26Q8NHZ8 85 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 LINC01560Q8TB33 94 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 ACMSDQ8TDX5 336 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 INTS12Q96CB8 462 aaKnown RBP9.69□□□□□ -0.86
CAPN3-202ENST00000337571 NTNG2Q96CW9 530 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 L3HYPDHQ96EM0 354 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 SLC35A4Q96G79 324 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 APIPQ96GX9 242 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 SFXN2Q96NB2 322 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 BTBD9Q96Q07 612 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 TMEM237Q96Q45 408 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 TUBA1CQ9BQE3 449 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 SFXN3Q9BWM7 321 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 RBM24Q9BX46 236 aaKnown RBP9.69□□□□□ -0.86
CAPN3-202ENST00000337571 ACPTQ9BZG2 426 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 OR2B2Q9GZK3 357 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 STMN4Q9H169 189 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-202ENST00000337571 LIME1Q9H400 295 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 ANKRA2Q9H9E1 313 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 MID1IP1Q9NPA3 183 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 MIEF1Q9NQG6 463 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 NDRG3Q9UGV2 375 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 MRTO4Q9UKD2 239 aaKnown RBP9.69□□□□□ -0.86
CAPN3-202ENST00000337571 PLEKHA6Q9Y2H5 1048 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 MRPS18CQ9Y3D5 142 aaKnown RBP9.69□□□□□ -0.86
CAPN3-202ENST00000337571 TIMM22Q9Y584 194 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 WIF1Q9Y5W5 379 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 CLCA1A8K7I4 914 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 H3BQF6 201 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 KIF2AO00139 706 aaPredicted RBP9.68□□□□□ -0.86
CAPN3-202ENST00000337571 RIPK2O43353 540 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 PLOD3O60568 738 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 TSPAN2O60636 221 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 COQ9O75208 318 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 SLITRK5O94991 958 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 MYL2P10916 166 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 DPP4P27487 766 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 STARP49675 285 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 NCBP2P52298 156 aaKnown RBP eCLIP9.68□□□□□ -0.86
CAPN3-202ENST00000337571 CORO7P57737 925 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 EEFSECP57772 596 aaKnown RBP9.68□□□□□ -0.86
CAPN3-202ENST00000337571 RAE1P78406 368 aaKnown RBP9.68□□□□□ -0.86
CAPN3-202ENST00000337571 KEAP1Q14145 624 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 ZNHIT3Q15649 155 aaPredicted RBP9.68□□□□□ -0.86
CAPN3-202ENST00000337571 CFAP157Q5JU67 520 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 SH2D4BQ5SQS7 431 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 OR2A2Q6IF42 318 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 GALNT18Q6P9A2 607 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 LUZP2Q86TE4 346 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 GRAMD2AQ8IUY3 354 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 C9orf106Q8NAJ2 232 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 OR4K17Q8NGC6 315 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 KIF18AQ8NI77 898 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 VSTM2LQ96N03 204 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 EBPLQ9BY08 206 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 CXXC4Q9H2H0 198 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 PIGMQ9H3S5 423 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 PTGES2Q9H7Z7 377 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 FOLH1BQ9HBA9 442 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 JKAMPQ9P055 326 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 PPP4R1LQ9P1A2 415 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 PSMC3IPQ9P2W1 217 aaPredicted RBP9.68□□□□□ -0.86
CAPN3-202ENST00000337571 TBK1Q9UHD2 729 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 GRID1Q9ULK0 1009 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 WBP11Q9Y2W2 641 aaKnown RBP9.68□□□□□ -0.86
CAPN3-202ENST00000337571 ITPR3Q14573 2671 aa9.68□□□□□ -0.86
CAPN3-202ENST00000337571 DOCK7Q96N67 2140 aa9.67□□□□□ -0.86
CAPN3-202ENST00000337571 SERTM1A2A2V5 107 aa9.67□□□□□ -0.86
CAPN3-202ENST00000337571 PLOD2O00469 737 aa9.67□□□□□ -0.86
CAPN3-202ENST00000337571 DIAPH2O60879 1101 aa9.67□□□□□ -0.86
CAPN3-202ENST00000337571 GOSR1O95249 250 aa9.67□□□□□ -0.86
CAPN3-202ENST00000337571 RAF1P04049 648 aa9.67□□□□□ -0.86
CAPN3-202ENST00000337571 JUNP05412 331 aaKnown RBP9.67□□□□□ -0.86
CAPN3-202ENST00000337571 KLK2P20151 261 aa9.67□□□□□ -0.86
CAPN3-202ENST00000337571 DDCP20711 480 aa9.67□□□□□ -0.86
CAPN3-202ENST00000337571 TCEA1P23193 301 aaKnown RBP9.67□□□□□ -0.86
CAPN3-202ENST00000337571 GRK2P25098 689 aa9.67□□□□□ -0.86
CAPN3-202ENST00000337571 GCAP28676 217 aa9.67□□□□□ -0.86
CAPN3-202ENST00000337571 SOX18P35713 384 aa9.67□□□□□ -0.86
CAPN3-202ENST00000337571 SLCO1A2P46721 670 aa9.67□□□□□ -0.86
CAPN3-202ENST00000337571 CCT5P48643 541 aa9.67□□□□□ -0.86
CAPN3-202ENST00000337571 PSMD4P55036 377 aaKnown RBP9.67□□□□□ -0.86
CAPN3-202ENST00000337571 GFRA1P56159 465 aa9.67□□□□□ -0.86
CAPN3-202ENST00000337571 DSCR4P56555 118 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-202ENST00000337571 ZNF763Q0D2J5 394 aa9.67□□□□□ -0.86
CAPN3-202ENST00000337571 ZNF155Q12901 538 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-202ENST00000337571 FOXF2Q12947 444 aa9.67□□□□□ -0.86
CAPN3-202ENST00000337571 SLC29A2Q14542 456 aa9.67□□□□□ -0.86
CAPN3-202ENST00000337571 BCL2A1Q16548 175 aa9.67□□□□□ -0.86
CAPN3-202ENST00000337571 DECR1Q16698 335 aa9.67□□□□□ -0.86
CAPN3-202ENST00000337571 CYP27C1Q4G0S4 372 aa9.67□□□□□ -0.86
CAPN3-202ENST00000337571 TGIF2LYQ8IUE0 185 aa9.67□□□□□ -0.86
CAPN3-202ENST00000337571 MEIOBQ8N635 442 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms