RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 OR2T4Q8NH00 348 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 DEDD2Q8WXF8 326 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 SGCDQ92629 289 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 SORBS1Q9BX66 1292 aaKnown RBP13.02□□□□□ -0.33
RTN4-202ENST00000337526 SLC17A9Q9BYT1 436 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 DPH1Q9BZG8 443 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 SLC39A1Q9NY26 324 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 PLCL2Q9UPR0 1127 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 WASH3PC4AMC7 463 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 APOC3P02656 99 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 GRIN2CQ14957 1233 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 SLC5A12Q1EHB4 618 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 PHF19Q5T6S3 580 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 FIGLAQ6QHK4 219 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 SPRED1Q7Z699 444 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 Q8N9G6 341 aaPredicted RBP13.02□□□□□ -0.33
RTN4-202ENST00000337526 ZNF565Q8N9K5 539 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 RPL3LQ92901 407 aaKnown RBP13.02□□□□□ -0.33
RTN4-202ENST00000337526 C7orf34Q96L11 122 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 SLC6A7Q99884 636 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 ZNF559Q9BR84 538 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 ALG8Q9BVK2 526 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 CXCL16Q9H2A7 254 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 CNOT2Q9NZN8 540 aaKnown RBP13.02□□□□□ -0.33
RTN4-202ENST00000337526 RABL2AQ9UBK7 228 aaPredicted RBP13.02□□□□□ -0.33
RTN4-202ENST00000337526 RABL2BQ9UNT1 228 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 AP1M2Q9Y6Q5 423 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 MYH9P35579 1960 aaKnown RBP13.02□□□□□ -0.33
RTN4-202ENST00000337526 AOAHP28039 575 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 SSTR4P31391 388 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 MC3RP41968 323 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 SNTA1Q13424 505 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 SLC14A2Q15849 920 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 COL28A1Q2UY09 1125 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 TTLL10Q6ZVT0 673 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 FTMTQ8N4E7 242 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 DEFB119Q8N690 84 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 TRMT10AQ8TBZ6 339 aaKnown RBP13.01□□□□□ -0.33
RTN4-202ENST00000337526 ZNF480Q8WV37 535 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 ZNF486Q96H40 463 aaPredicted RBP13.01□□□□□ -0.33
RTN4-202ENST00000337526 WDR83Q9BRX9 315 aaKnown RBP13.01□□□□□ -0.33
RTN4-202ENST00000337526 PDE7BQ9NP56 450 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 B3GNT3Q9Y2A9 372 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 A0A1W2PPL8 197 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 CTDSP2O14595 271 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 ENDOUP21128 410 aaKnown RBP13.01□□□□□ -0.33
RTN4-202ENST00000337526 OR5T2Q8NGG2 359 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 DAZLQ92904 295 aaKnown RBP13.01□□□□□ -0.33
RTN4-202ENST00000337526 PNPLA2Q96AD5 504 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 PADI2Q9Y2J8 665 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 DNMT3AQ9Y6K1 912 aaPredicted RBP13.01□□□□□ -0.33
RTN4-202ENST00000337526 DHPSP49366 369 aaPredicted RBP13.01□□□□□ -0.33
RTN4-202ENST00000337526 HBA1P69905 142 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 PLCXD2Q0VAA5 305 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 RUNX3Q13761 415 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 CDNFQ49AH0 187 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 ZNF542PQ5EBM4 170 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 GARNL3Q5VVW2 1013 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 UBE2UQ5VVX9 321 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 FUNDC1Q8IVP5 155 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 BEST3Q8N1M1 668 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 TSACCQ96A04 125 aaPredicted RBP13.01□□□□□ -0.33
RTN4-202ENST00000337526 A0A1B0GVC2 190 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 CTSAP10619 480 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 HOXD9P28356 352 aaPredicted RBP13.01□□□□□ -0.33
RTN4-202ENST00000337526 ELOCQ15369 112 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 TSC22D1Q15714 1073 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 NHSL2Q5HYW2 709 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 RNF111Q6ZNA4 994 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 ALDH16A1Q8IZ83 802 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 CREB3L4Q8TEY5 395 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 FOXJ1Q92949 421 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 ISG20Q96AZ6 181 aaKnown RBP13.01□□□□□ -0.33
RTN4-202ENST00000337526 ZDHHC12Q96GR4 267 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 PELOQ9BRX2 385 aaKnown RBP13.01□□□□□ -0.33
RTN4-202ENST00000337526 MYNNQ9NPC7 610 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 KCNIP3Q9Y2W7 256 aa13.01□□□□□ -0.33
RTN4-202ENST00000337526 CENPBD1B2RD01 187 aa13□□□□□ -0.33
RTN4-202ENST00000337526 HSPA12AO43301 675 aa13□□□□□ -0.33
RTN4-202ENST00000337526 NUDT7P0C024 238 aa13□□□□□ -0.33
RTN4-202ENST00000337526 C5AR1P21730 350 aa13□□□□□ -0.33
RTN4-202ENST00000337526 CTBP2P56545 445 aa13□□□□□ -0.33
RTN4-202ENST00000337526 HERV-K104P61576 105 aa13□□□□□ -0.33
RTN4-202ENST00000337526 LIPIQ6XZB0 460 aa13□□□□□ -0.33
RTN4-202ENST00000337526 ZNF767PQ75MW2 155 aa13□□□□□ -0.33
RTN4-202ENST00000337526 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13□□□□□ -0.335e-12■■□□□ 11.4
RTN4-202ENST00000337526 TAS2R8Q9NYW2 309 aa13□□□□□ -0.33
RTN4-202ENST00000337526 GPR89AB7ZAQ6 455 aa13□□□□□ -0.33
RTN4-202ENST00000337526 CASC3O15234 703 aaKnown RBP13□□□□□ -0.33
RTN4-202ENST00000337526 NDUFB2O95178 105 aa13□□□□□ -0.33
RTN4-202ENST00000337526 SFTPBP07988 381 aa13□□□□□ -0.33
RTN4-202ENST00000337526 GPR89BP0CG08 455 aa13□□□□□ -0.33
RTN4-202ENST00000337526 TNFSF8P32971 234 aa13□□□□□ -0.33
RTN4-202ENST00000337526 PITPNBP48739 271 aa13□□□□□ -0.33
RTN4-202ENST00000337526 RIDAP52758 137 aaKnown RBP13□□□□□ -0.33
RTN4-202ENST00000337526 PDX1P52945 283 aa13□□□□□ -0.33
RTN4-202ENST00000337526 RIPPLY1Q0D2K3 151 aa13□□□□□ -0.33
RTN4-202ENST00000337526 RNASE10Q5GAN6 216 aaKnown RBP13□□□□□ -0.33
RTN4-202ENST00000337526 LCTLQ6UWM7 567 aa13□□□□□ -0.33
RTN4-202ENST00000337526 Q6ZPB1 254 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms