RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 TRBV23OR9-2A0A075B6M9 112 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 A0A075B6Q4 140 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 C1QTNF3-AMACRE9PGA6 284 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 ADAMDEC1O15204 470 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 VEGFDO43915 354 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 TOXO94900 526 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 GADD45GO95257 159 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 RECKO95980 971 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 C8orf89P0DMQ9 161 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 CBX5P45973 191 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 LIM2P55344 173 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 ABATP80404 500 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 LSM11P83369 360 aaKnown RBP eCLIP13.07□□□□□ -0.32
SF1-202ENST00000334944 EEF1A2Q05639 463 aaKnown RBP13.07□□□□□ -0.32
SF1-202ENST00000334944 PCDH1Q08174 1060 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 GLYR1Q49A26 553 aaPredicted RBP13.07□□□□□ -0.32
SF1-202ENST00000334944 C2orf27AQ580R0 203 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 FBXO46Q6PJ61 603 aaPredicted RBP13.07□□□□□ -0.32
SF1-202ENST00000334944 DEF8Q6ZN54 512 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 LIX1LQ8IVB5 337 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 SYT14Q8NB59 555 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 LSM14AQ8ND56 463 aaKnown RBP13.07□□□□□ -0.32
SF1-202ENST00000334944 C19orf18Q8NEA5 215 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 OR52H1Q8NGJ2 320 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 OR5K2Q8NHB8 316 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 RADILQ96JH8 1075 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 IL4I1Q96RQ9 567 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 WACQ9BTA9 647 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 KCNK12Q9HB15 430 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 TRBV4-1A0A0J9YWV2 114 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 C17orf113A0A1B0GUU1 675 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 C5orf58C9J3I9 102 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 LGALS8O00214 317 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 AKAP8O43823 692 aaKnown RBP13.07□□□□□ -0.32
SF1-202ENST00000334944 GASTP01350 101 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 CHMP24386 653 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 BSGP35613 385 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 ETV1P50549 477 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 MLF2Q15773 248 aaPredicted RBP13.07□□□□□ -0.32
SF1-202ENST00000334944 TUSC1Q2TAM9 212 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 LIPKQ5VXJ0 399 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 TAGAPQ8N103 731 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 GOT1L1Q8NHS2 421 aaPredicted RBP13.07□□□□□ -0.32
SF1-202ENST00000334944 TBC1D20Q96BZ9 403 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 TMEM19Q96HH6 336 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 LINC00615Q96LM1 132 aaPredicted RBP13.07□□□□□ -0.32
SF1-202ENST00000334944 KLHL15Q96M94 604 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 INSM2Q96T92 566 aaPredicted RBP13.07□□□□□ -0.32
SF1-202ENST00000334944 C3orf14Q9HBI5 128 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 HHATLQ9HCP6 504 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 C11orf16Q9NQ32 467 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 KLK4Q9Y5K2 254 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 TP53BP1Q12888 1972 aaPredicted RBP13.06□□□□□ -0.32
SF1-202ENST00000334944 C2orf16Q68DN1 1984 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 ARPC4-TTLL3A0A0A6YYG9 625 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 ISM1B1AKI9 464 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 FFAR1O14842 300 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 NARSO43776 548 aaKnown RBP13.06□□□□□ -0.32
SF1-202ENST00000334944 SEMA7AO75326 666 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 ERAL1O75616 437 aaKnown RBP13.06□□□□□ -0.32
SF1-202ENST00000334944 ZNF81P51508 661 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 KRT33BQ14525 404 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 PDGFRLQ15198 375 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 IRF4Q15306 451 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 MICAQ29983 383 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 TMEM52BQ4KMG9 183 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 LCN1P1Q5VSP4 162 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 AGBL4Q5VU57 503 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 TRIQKQ629K1 86 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 BCDIN3DQ7Z5W3 292 aaKnown RBP13.06□□□□□ -0.32
SF1-202ENST00000334944 OR4C15Q8NGM1 316 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 XAGE5Q8WWM1 108 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 COX14Q96I36 57 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 OPALINQ96PE5 141 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 AIF1LQ9BQI0 150 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 PPA2Q9H2U2 334 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 TRPC4Q9UBN4 977 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 STON1Q9Y6Q2 735 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 LAMA1P25391 3075 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 A0A1W2PPV9 198 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 PDE9AO76083 593 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 IFNA16P05015 189 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 SLC2A2P11168 524 aaPredicted RBP13.06□□□□□ -0.32
SF1-202ENST00000334944 MAPK9P45984 424 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 ERVK-21P61565 698 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 SYPL1Q16563 259 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 METRNLQ641Q3 311 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 C22orf42Q6IC83 251 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 KIAA1211LQ6NV74 962 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 LCTLQ6UWM7 567 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 WDR53Q7Z5U6 358 aaPredicted RBP13.06□□□□□ -0.32
SF1-202ENST00000334944 HYLS1Q96M11 299 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 TEFMQ96QE5 360 aaKnown RBP13.06□□□□□ -0.32
SF1-202ENST00000334944 PRR14Q9BWN1 585 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 MS4A8Q9BY19 250 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 WDR26Q9H7D7 661 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 B3GAT2Q9NPZ5 323 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 CA5BQ9Y2D0 317 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 PCDHGA2Q9Y5H1 932 aa13.06□□□□□ -0.32
SF1-202ENST00000334944 KIF26AQ9ULI4 1882 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms