RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 ANKRD53Q8N9V6 530 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 MARVELD3Q96A59 401 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 EXOSC8Q96B26 276 aaKnown RBP12.93□□□□□ -0.34
SYNE3-201ENST00000334258 TRIM43Q96BQ3 446 aaPredicted RBP12.93□□□□□ -0.34
SYNE3-201ENST00000334258 SECISBP2Q96T21 854 aaKnown RBP12.93□□□□□ -0.34
SYNE3-201ENST00000334258 RNF32Q9H0A6 362 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 DPAGT1Q9H3H5 408 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 KCNK12Q9HB15 430 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 ZFP64Q9NPA5 681 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 MYNNQ9NPC7 610 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 PRKAB1Q9Y478 270 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 CACNG2Q9Y698 323 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 DVL2O14641 736 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 SLCO2B1O94956 709 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 KCNJ5P48544 419 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 PRKAG1P54619 331 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 LMAN2Q12907 356 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 SYPL1Q16563 259 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 AANATQ16613 207 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 COL28A1Q2UY09 1125 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 ZNF697Q5TEC3 545 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 TMEM65Q6PI78 240 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 SPRYD4Q8WW59 207 aaPredicted RBP12.93□□□□□ -0.34
SYNE3-201ENST00000334258 IGSF21Q96ID5 467 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 C12orf66Q96MD2 445 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 ZFP3Q96NJ6 502 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 TREX2Q9BQ50 279 aaPredicted RBP12.93□□□□□ -0.34
SYNE3-201ENST00000334258 KLHL1Q9NR64 748 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 H2AFY2Q9P0M6 372 aaPredicted RBP12.93□□□□□ -0.34
SYNE3-201ENST00000334258 SH2B3Q9UQQ2 575 aa12.93□□□□□ -0.34
SYNE3-201ENST00000334258 TRANK1O15050 2925 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 PLXNA3P51805 1871 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 MYO10Q9HD67 2058 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 NRG2O14511 850 aaPredicted RBP12.92□□□□□ -0.34
SYNE3-201ENST00000334258 PTBP1P26599 531 aaKnown RBP eCLIP12.92□□□□□ -0.341e-10■■■■■ 27.8
SYNE3-201ENST00000334258 CD70P32970 193 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 SLC6A11P48066 632 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 CTSCP53634 463 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 VSX2P58304 361 aaPredicted RBP12.92□□□□□ -0.34
SYNE3-201ENST00000334258 PDE7AQ13946 482 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 MFSD13AQ14CX5 517 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 NDUFA9Q16795 377 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 TMEM107Q6UX40 140 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 KLHL36Q8N4N3 616 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 MYLIPQ8WY64 445 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 PRR14Q9BWN1 585 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 EMC7Q9NPA0 242 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 CHST10O43529 356 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 HRO43593 1189 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 HMGA1P17096 107 aaKnown RBP12.92□□□□□ -0.34
SYNE3-201ENST00000334258 GIFP27352 417 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 ACSL1P33121 698 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 OR56A3Q8NH54 315 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 ZNF480Q8WV37 535 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 APOBEC4Q8WW27 367 aaKnown RBP12.92□□□□□ -0.34
SYNE3-201ENST00000334258 CHFRQ96EP1 664 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 LYSMD1Q96S90 227 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 EFCAB11Q9BUY7 163 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 RSPO3Q9BXY4 272 aaPredicted RBP12.92□□□□□ -0.34
SYNE3-201ENST00000334258 RBCK1Q9BYM8 510 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 ABCG4Q9H172 646 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 FGF20Q9NP95 211 aaPredicted RBP12.92□□□□□ -0.34
SYNE3-201ENST00000334258 CNIH4Q9P003 139 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 CXXC1Q9P0U4 656 aaPredicted RBP12.92□□□□□ -0.34
SYNE3-201ENST00000334258 IL20RAQ9UHF4 553 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 A4GNTQ9UNA3 340 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 PPIEQ9UNP9 301 aaKnown RBP12.92□□□□□ -0.34
SYNE3-201ENST00000334258 ASB4Q9Y574 426 aa12.92□□□□□ -0.34
SYNE3-201ENST00000334258 C1GALT1C1LP0DN25 315 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 MINDY4Q4G0A6 757 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 PLA1AQ53H76 456 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 TRILQ7L0X0 811 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 GPR135Q8IZ08 494 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 OR5D16Q8NGK9 328 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 RIT1Q92963 219 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 ECHDC3Q96DC8 303 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 FCRL4Q96PJ5 515 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 TBX5Q99593 518 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 RIOK2Q9BVS4 552 aaKnown RBP12.91□□□□□ -0.34
SYNE3-201ENST00000334258 CACNG6Q9BXT2 260 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 GHITMQ9H3K2 345 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 INPPL1O15357 1258 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 MMP20O60882 483 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 CD3GP09693 182 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 HK1P19367 917 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 PPP2R1BP30154 601 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 PITPNBP48739 271 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 DSG2Q14126 1118 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 NDUFAF5Q5TEU4 345 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 SLC30A6Q6NXT4 461 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 OR10Z1Q8NGY1 313 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 FBXW5Q969U6 566 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 C19orf43Q9BQ61 176 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 IFT22Q9H7X7 185 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 CERS4Q9HA82 394 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 HRGP04196 525 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 NPPBP16860 134 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 CDK5Q00535 292 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 BTN1A1Q13410 526 aa12.91□□□□□ -0.34
SYNE3-201ENST00000334258 DUSP6Q16828 381 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms