RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 TDRD6O60522 2096 aaKnown RBP11.13□□□□□ -0.63
HDAC6-201ENST00000334136 HCN1O60741 890 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 KDM4BO94953 1096 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 IL7P13232 177 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 ETFAP13804 333 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 UGT2B7P16662 529 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 IL1RNP18510 177 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 CSNK2A2P19784 350 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-201ENST00000334136 ZNF81P51508 661 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 PPP2R2BQ00005 443 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 PROX2Q3B8N5 592 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 NKAIN2Q5VXU1 208 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 LHFPL3Q86UP9 236 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 MCATQ8IVS2 390 aaKnown RBP11.13□□□□□ -0.63
HDAC6-201ENST00000334136 Q8N402 240 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 OR9Q2Q8NGE9 314 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 ISL2Q96A47 359 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 ZBED6CLQ96FA7 236 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-201ENST00000334136 MND1Q9BWT6 205 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 FAM86C1Q9NVL1 165 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 SEC14L4Q9UDX3 406 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 FAM25EA8MYX2 175 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 GFYI3L273 518 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 GAPDHSO14556 408 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-201ENST00000334136 UGDHO60701 494 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 GNA13Q14344 377 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 CADM2Q8N3J6 435 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 CHCHD4Q8N4Q1 142 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 AGBL5Q8NDL9 886 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 TNFAIP8L1Q8WVP5 186 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 RFKQ969G6 155 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 CCDC74AQ96AQ1 378 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 TMEM80Q96HE8 168 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 MAELQ96JY0 434 aaKnown RBP11.12□□□□□ -0.63
HDAC6-201ENST00000334136 CDC6Q99741 560 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 DOHHQ9BU89 302 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 ACOT13Q9NPJ3 140 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 DCAF13Q9NV06 445 aaKnown RBP11.12□□□□□ -0.63
HDAC6-201ENST00000334136 ABCG2Q9UNQ0 655 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 B3GNT3Q9Y2A9 372 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 NINQ8N4C6 2090 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 CLCA1A8K7I4 914 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 HLA-DQA2P01906 255 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 SP9P0CG40 484 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 CAPZA2P47755 286 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 RPS26P62854 115 aaKnown RBP11.12□□□□□ -0.63
HDAC6-201ENST00000334136 GPLD1P80108 840 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 DMWDQ09019 674 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 MAD2L1BPQ15013 274 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-201ENST00000334136 TMEM35AQ53FP2 167 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 FAAH2Q6GMR7 532 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 LAIR1Q6GTX8 287 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 B3GNT8Q7Z7M8 397 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 KLHDC8AQ8IYD2 350 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 FAM98AQ8NCA5 519 aaKnown RBP11.12□□□□□ -0.63
HDAC6-201ENST00000334136 MAP3K3Q99759 626 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 TSSK6Q9BXA6 273 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 KLHL31Q9H511 634 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 PFDN2Q9UHV9 154 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 A8MUA0 341 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 FAM47E-STBD1D6RA91 191 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 MPIP34949 423 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 PGDP52209 483 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 PSMD4P55036 377 aaKnown RBP11.12□□□□□ -0.63
HDAC6-201ENST00000334136 C1orf189Q5VU69 101 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 STEAP3Q658P3 488 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 KIAA1143Q96AT1 154 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-201ENST00000334136 NTMT1Q9BV86 223 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 KCNN2Q9H2S1 579 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 PLAC1Q9HBJ0 212 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 IFT52Q9Y366 437 aa11.12□□□□□ -0.63
HDAC6-201ENST00000334136 MIA3Q5JRA6 1907 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 IRGMA1A4Y4 181 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 LAMP1P11279 417 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 MAP2K3P46734 347 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 CLDN8P56748 225 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 ADPRMQ3LIE5 342 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 FAM83FQ8NEG4 500 aaPredicted RBP11.11□□□□□ -0.63
HDAC6-201ENST00000334136 RSC1A1Q92681 617 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 EFHD2Q96C19 240 aaPredicted RBP11.11□□□□□ -0.63
HDAC6-201ENST00000334136 APIPQ96GX9 242 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 ZNF583Q96ND8 569 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 MROQ9BYG7 248 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 RBCK1Q9BYM8 510 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 FSCN3Q9NQT6 498 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 C1GALT1Q9NS00 363 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 COMMD9Q9P000 198 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 PCDHGA4Q9Y5G9 962 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 C2orf92A0A1B0GVN3 265 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 PATE3B3GLJ2 98 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 PAPLNO95428 1278 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 NUDT14O95848 222 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 PKLRP30613 574 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 SOX3P41225 446 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 SLC3A1Q07837 685 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 ZNF763Q0D2J5 394 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 CYHR1Q6ZMK1 362 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 ZNF547Q8IVP9 402 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 OR2L3Q8NG85 312 aa11.11□□□□□ -0.63
HDAC6-201ENST00000334136 GTF2H4Q92759 462 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms