RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 FLNCQ14315 2725 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 A0A087WV62 115 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 C5orf58C9J3I9 102 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 FAM227AF5H4B4 570 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 CYR61O00622 381 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 CLDN4O14493 209 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 SUV39H1O43463 412 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 CHST10O43529 356 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 PRKD3O94806 890 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 ATP1B1P05026 303 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 CD63P08962 238 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 ETFAP13804 333 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 MAGEA2P43356 314 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 XCR1P46094 333 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 EMP2P54851 167 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 SELENOWP63302 87 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 EEF1A2Q05639 463 aaKnown RBP15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 GK3PQ14409 553 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 LPCAT4Q643R3 524 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 PIWIL3Q7Z3Z3 882 aaKnown RBP15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 CCDC116Q8IYX3 515 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 C10orf111Q8N326 155 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 SVOPLQ8N434 492 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 SUN3Q8TAQ9 357 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 PNPT1Q8TCS8 783 aaKnown RBP15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 ELP4Q96EB1 424 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 PEX11GQ96HA9 241 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 ZNF607Q96SK3 696 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 PELOQ9BRX2 385 aaKnown RBP15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 ZBTB20Q9HC78 741 aaPredicted RBP15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 IL1RAPQ9NPH3 570 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 LANCL2Q9NS86 450 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 ZCCHC3Q9NUD5 404 aaKnown RBP15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 CALML5Q9NZT1 146 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 P2RX2Q9UBL9 471 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 NXT1Q9UKK6 140 aaKnown RBP15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 RAB26Q9ULW5 256 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 LIPT1Q9Y234 373 aa15.29■□□□□ 0.04
PDLIM1-201ENST00000329399 MYO18BQ8IUG5 2567 aa15.28■□□□□ 0.04
PDLIM1-201ENST00000329399 PYCARD-AS1I3L0S3 204 aa15.28■□□□□ 0.04
PDLIM1-201ENST00000329399 CDC123O75794 336 aaPredicted RBP15.28■□□□□ 0.04
PDLIM1-201ENST00000329399 CELA2AP08217 269 aa15.28■□□□□ 0.04
PDLIM1-201ENST00000329399 CPMP14384 443 aa15.28■□□□□ 0.04
PDLIM1-201ENST00000329399 CDK9P50750 372 aaKnown RBP15.28■□□□□ 0.04
PDLIM1-201ENST00000329399 CLCN2P51788 898 aa15.28■□□□□ 0.04
PDLIM1-201ENST00000329399 ZBTB49Q6ZSB9 765 aa15.28■□□□□ 0.04
PDLIM1-201ENST00000329399 LANCL3Q6ZV70 420 aa15.28■□□□□ 0.04
PDLIM1-201ENST00000329399 FBXO30Q8TB52 745 aa15.28■□□□□ 0.04
PDLIM1-201ENST00000329399 ZNF675Q8TD23 568 aa15.28■□□□□ 0.04
PDLIM1-201ENST00000329399 DOHHQ9BU89 302 aa15.28■□□□□ 0.04
PDLIM1-201ENST00000329399 C5AR2Q9P296 337 aa15.28■□□□□ 0.04
PDLIM1-201ENST00000329399 ZNF639Q9UID6 485 aa15.28■□□□□ 0.04
PDLIM1-201ENST00000329399 BAHCC1Q9P281 2608 aa15.27■□□□□ 0.04
PDLIM1-201ENST00000329399 IGHV3-20A0A0C4DH32 117 aa15.27■□□□□ 0.04
PDLIM1-201ENST00000329399 GLOD5A6NK44 160 aa15.27■□□□□ 0.04
PDLIM1-201ENST00000329399 B8ZZF3 427 aa15.27■□□□□ 0.04
PDLIM1-201ENST00000329399 MKRN2OSH3BPM6 223 aa15.27■□□□□ 0.04
PDLIM1-201ENST00000329399 PEX12O00623 359 aa15.27■□□□□ 0.04
PDLIM1-201ENST00000329399 HEXBP07686 556 aa15.27■□□□□ 0.04
PDLIM1-201ENST00000329399 ZNF26P17031 533 aaPredicted RBP15.27■□□□□ 0.04
PDLIM1-201ENST00000329399 ITGA2P17301 1181 aa15.27■□□□□ 0.04
PDLIM1-201ENST00000329399 MATN1P21941 496 aa15.27■□□□□ 0.04
PDLIM1-201ENST00000329399 GALNSP34059 522 aa15.27■□□□□ 0.04
PDLIM1-201ENST00000329399 PCBP3P57721 371 aaKnown RBP15.27■□□□□ 0.04
PDLIM1-201ENST00000329399 C19orf57Q0VDD7 668 aa15.27■□□□□ 0.04
PDLIM1-201ENST00000329399 LRRC23Q53EV4 343 aaPredicted RBP15.27■□□□□ 0.04
PDLIM1-201ENST00000329399 COX20Q5RI15 118 aa15.27■□□□□ 0.04
PDLIM1-201ENST00000329399 SWT1Q5T5J6 900 aaKnown RBP15.27■□□□□ 0.04
PDLIM1-201ENST00000329399 HMBOX1Q6NT76 420 aa15.27■□□□□ 0.04
PDLIM1-201ENST00000329399 TCTN3Q6NUS6 607 aa15.27■□□□□ 0.04
PDLIM1-201ENST00000329399 KRT73Q86Y46 540 aa15.27■□□□□ 0.04
PDLIM1-201ENST00000329399 ARMC8Q8IUR7 673 aa15.27■□□□□ 0.04
PDLIM1-201ENST00000329399 LGI4Q8N135 537 aa15.27■□□□□ 0.04
PDLIM1-201ENST00000329399 OR5AK3PQ8NH89 298 aa15.27■□□□□ 0.04
PDLIM1-201ENST00000329399 PMM1Q92871 262 aa15.27■□□□□ 0.04
PDLIM1-201ENST00000329399 SDCCAG3Q96C92 435 aa15.27■□□□□ 0.04
PDLIM1-201ENST00000329399 BCL2L10Q9HD36 194 aa15.27■□□□□ 0.04
PDLIM1-201ENST00000329399 GIN1Q9NXP7 522 aa15.27■□□□□ 0.04
PDLIM1-201ENST00000329399 PCDHGB3Q9Y5G1 929 aa15.27■□□□□ 0.04
PDLIM1-201ENST00000329399 PLOD3O60568 738 aa15.27■□□□□ 0.03
PDLIM1-201ENST00000329399 CTNSO60931 367 aa15.27■□□□□ 0.03
PDLIM1-201ENST00000329399 SERPINB7O75635 380 aa15.27■□□□□ 0.03
PDLIM1-201ENST00000329399 CST1P01037 141 aa15.27■□□□□ 0.03
PDLIM1-201ENST00000329399 TFPTP0C1Z6 253 aa15.27■□□□□ 0.03
PDLIM1-201ENST00000329399 SLC35E2P0CK97 266 aa15.27■□□□□ 0.03
PDLIM1-201ENST00000329399 COX6A1P12074 109 aa15.27■□□□□ 0.03
PDLIM1-201ENST00000329399 UQCRBP14927 111 aa15.27■□□□□ 0.03
PDLIM1-201ENST00000329399 SOX11P35716 441 aa15.27■□□□□ 0.03
PDLIM1-201ENST00000329399 FEN1P39748 380 aaKnown RBP15.27■□□□□ 0.03
PDLIM1-201ENST00000329399 CD97P48960 835 aa15.27■□□□□ 0.03
PDLIM1-201ENST00000329399 ARHGDIAP52565 204 aa15.27■□□□□ 0.03
PDLIM1-201ENST00000329399 HSD17B7P56937 341 aa15.27■□□□□ 0.03
PDLIM1-201ENST00000329399 BTG2P78543 158 aa15.27■□□□□ 0.03
PDLIM1-201ENST00000329399 TMEM205Q6UW68 189 aa15.27■□□□□ 0.03
PDLIM1-201ENST00000329399 ASB18Q6ZVZ8 466 aa15.27■□□□□ 0.03
PDLIM1-201ENST00000329399 AMIGO2Q86SJ2 522 aa15.27■□□□□ 0.03
PDLIM1-201ENST00000329399 OR2L13Q8N349 312 aa15.27■□□□□ 0.03
PDLIM1-201ENST00000329399 GALNT16Q8N428 558 aa15.27■□□□□ 0.03
PDLIM1-201ENST00000329399 NUP43Q8NFH3 380 aa15.27■□□□□ 0.03
PDLIM1-201ENST00000329399 NRBF2Q96F24 287 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms