RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 GKN1Q9NS71 199 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 CA10Q9NS85 328 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 POLR3HQ9Y535 204 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-201ENST00000328923 TMEM218A2RU14 115 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 MBLAC1A4D2B0 266 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-201ENST00000328923 CASKO14936 926 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 PRKAR2AP13861 404 aaKnown RBP11.17□□□□□ -0.62
SHMT2-201ENST00000328923 NQO2P16083 231 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 ELK1P19419 428 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 PDHA2P29803 388 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 HOXA11P31270 313 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-201ENST00000328923 RPS25P62851 125 aaKnown RBP11.17□□□□□ -0.62
SHMT2-201ENST00000328923 SREBF2Q12772 1141 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 HTR4Q13639 388 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 RBBP7Q16576 425 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 C17orf99Q6UX52 265 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 B3GLCTQ6Y288 498 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 SLC29A4Q7RTT9 530 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 BHLHA9Q7RTU4 235 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 SLC5A8Q8N695 610 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 TEFMQ96QE5 360 aaKnown RBP11.17□□□□□ -0.62
SHMT2-201ENST00000328923 RSRP1Q9BUV0 290 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 CACNG6Q9BXT2 260 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 OPN3Q9H1Y3 402 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-201ENST00000328923 GJD2Q9UKL4 321 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 ACSL6Q9UKU0 697 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 SAMD4AQ9UPU9 718 aaKnown RBP11.17□□□□□ -0.62
SHMT2-201ENST00000328923 PLEKHA6Q9Y2H5 1048 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 LAMA2P24043 3122 aaKnown RBP11.17□□□□□ -0.62
SHMT2-201ENST00000328923 TRBV5-3A0A0A0MS03 114 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 SMIM35A0A1B0GVV1 85 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 COLCA2A8K830 154 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 LDB2O43679 373 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 ANXA7P20073 488 aaKnown RBP11.17□□□□□ -0.62
SHMT2-201ENST00000328923 DRD5P21918 477 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 AHCYP23526 432 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 GZMMP51124 257 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 CDC42EP1Q00587 391 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 MAP4K2Q12851 820 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 MAPKAPK3Q16644 382 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 FAM174BQ3ZCQ3 159 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 SGO1Q5FBB7 561 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 RNASE12Q5GAN4 147 aaKnown RBP11.17□□□□□ -0.62
SHMT2-201ENST00000328923 CMIPQ8IY22 773 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 TCTEX1D2Q8WW35 142 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 C1GALT1C1Q96EU7 318 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 ZPBPQ9BS86 351 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 MED10Q9BTT4 135 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 EDEM2Q9BV94 578 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 POLDIP3Q9BY77 421 aaKnown RBP11.17□□□□□ -0.62
SHMT2-201ENST00000328923 FN3KQ9H479 309 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 NKIRAS2Q9NYR9 191 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 FBXL21Q9UKT6 434 aa11.17□□□□□ -0.62
SHMT2-201ENST00000328923 PXNP49023 591 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-201ENST00000328923 ITGA1P56199 1179 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 HNRNPKP61978 463 aaKnown RBP eCLIP11.16□□□□□ -0.62
SHMT2-201ENST00000328923 KRT33BQ14525 404 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 CRTC2Q53ET0 693 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-201ENST00000328923 PYY3Q5JQD4 70 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 ZC3H14Q6PJT7 736 aaKnown RBP11.16□□□□□ -0.62
SHMT2-201ENST00000328923 TAC4Q86UU9 113 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 PRSS58Q8IYP2 241 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 THEM5Q8N1Q8 247 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 OR4A15Q8NGL6 344 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 OSMRQ99650 979 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 NIPSNAP1Q9BPW8 284 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 TMPRSS5Q9H3S3 457 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 UNKLQ9H9P5 680 aaKnown RBP11.16□□□□□ -0.62
SHMT2-201ENST00000328923 KLHL1Q9NR64 748 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 IMP3Q9NV31 184 aaKnown RBP11.16□□□□□ -0.62
SHMT2-201ENST00000328923 MGAT4CQ9UBM8 478 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 HTTP42858 3142 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 TRIP12Q14669 1992 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-201ENST00000328923 A0A0A6YYC8 382 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-201ENST00000328923 OR6C74A6NCV1 312 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 I3L1I5 382 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-201ENST00000328923 KIAA0355O15063 1070 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 PPIHO43447 177 aaKnown RBP11.16□□□□□ -0.62
SHMT2-201ENST00000328923 PIP5K1CO60331 668 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 GALR3O60755 368 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-201ENST00000328923 IGLV3-25P01717 112 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 FOLR2P14207 255 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 KCNE1P15382 129 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 DGKEP52429 567 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 STC1P52823 247 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 SEC61A1P61619 476 aaKnown RBP11.16□□□□□ -0.62
SHMT2-201ENST00000328923 MLLT11Q13015 90 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-201ENST00000328923 RNF165Q6ZSG1 346 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 USP30Q70CQ3 517 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 SSX6Q7RTT6 188 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 FAM122BQ7Z309 247 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 KDELC2Q7Z4H8 507 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 ANKRD46Q86W74 232 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 ARMC10Q8N2F6 343 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 NKAPQ8N5F7 415 aaKnown RBP11.16□□□□□ -0.62
SHMT2-201ENST00000328923 CCDC54Q8NEL0 328 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 OR10J5Q8NHC4 309 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 HASPINQ8TF76 798 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 S100PBPQ96BU1 408 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 ARMC5Q96C12 935 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms