RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 ASB4Q9Y574 426 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 STON1Q9Y6Q2 735 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 ZNF780BQ9Y6R6 833 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 SLC35F4A4IF30 521 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 PRODHO43272 600 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 SLC2A10O95528 541 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 ACADMP11310 421 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 GJA4P35212 333 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 CDK5Q00535 292 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 TBRG1Q3YBR2 411 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 DDI2Q5TDH0 399 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 AGBL4Q5VU57 503 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 SMARCD3Q6STE5 483 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 HSDL2Q6YN16 418 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 NRMQ8IXM6 262 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 UBQLNLQ8IYU4 475 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 ZNF784Q8NCA9 323 aaPredicted RBP13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 EFHD2Q96C19 240 aaPredicted RBP13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 MIXL1Q9H2W2 232 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 SYNPO2LQ9H987 977 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 PRDM7Q9NQW5 492 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 TAS2R7Q9NYW3 318 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 GSTK1Q9Y2Q3 226 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 N6AMT1Q9Y5N5 214 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 A0A0G2JPF8 293 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 SNTNA6NMZ2 147 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 HNRNPCL2B2RXH8 293 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 HNRNPCL3B7ZW38 293 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 HNRNPCL4P0DMR1 293 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 ATXN8OSP0DMR3 200 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 GSTM3P21266 225 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 IFNGR2P38484 337 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 GNA13Q14344 377 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 TRAM2Q15035 370 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 ZFP69Q49AA0 526 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 DTX3Q8N9I9 347 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 SIMC1Q8NDZ2 872 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 PIGXQ8TBF5 258 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 TTYH2Q9BSA4 534 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 KLHL28Q9NXS3 571 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 TESQ9UGI8 421 aaKnown RBP13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 C2orf92A0A1B0GVN3 265 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 CCDC182A6NF36 153 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 PIP5K1CO60331 668 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 UBXN7O94888 489 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 ACP2P11117 423 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 RFX3P48380 749 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 SLC9A3P48764 834 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 FABP5Q01469 135 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 SDE2Q6IQ49 451 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 SLC16A11Q8NCK7 471 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 ATP6V1C2Q8NEY4 427 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 BBS1Q8NFJ9 593 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 NLGN4YQ8NFZ3 816 aaPredicted RBP13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 GNPDA2Q8TDQ7 276 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 HERVK_113Q902F9 699 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 MCHR1Q99705 422 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 PRRG3Q9BZD7 231 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 SLC38A1Q9H2H9 487 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 H2AFY2Q9P0M6 372 aaPredicted RBP13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 APOBEC3BQ9UH17 382 aaKnown RBP13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 MEIOCA2RUB1 952 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 EMC8O43402 210 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 GUCY1B2O75343 617 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 LALBAP00709 142 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 CPEP16870 476 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 APEX1P27695 318 aaKnown RBP13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 TRIM23P36406 574 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 MAN2A2P49641 1150 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 SLC16A1P53985 500 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 IFITM2Q01629 132 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 TMEM35AQ53FP2 167 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 SLC35F1Q5T1Q4 408 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 CCNJQ5T5M9 372 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 TTLQ8NG68 377 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 OR2L5Q8NG80 312 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 OR2L3Q8NG85 312 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 OR56A1Q8NGH5 318 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 KATNB1Q9BVA0 655 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 PINK1Q9BXM7 581 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 C11orf54Q9H0W9 315 aaPredicted RBP13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 NT5DC2Q9H857 520 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 ZSCAN32Q9NX65 697 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 GDE1Q9NZC3 331 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 PLEKHB1Q9UF11 243 aaPredicted RBP13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 SCN2AQ99250 2005 aa13.17□□□□□ -0.3
ATP2C1-201ENST00000328560 TBC1D3DA0A087WVF3 549 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 TBC1D3IA0A087WXS9 549 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 TBC1D3EA0A087X179 549 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 TBC1D3KA0A087X1G2 549 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 TBC1D3FA6NER0 549 aaPredicted RBP13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 CD8B2A6NJW9 211 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 TBC1D3LB9A6J9 549 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 IL1AP01583 271 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 TBC1D3HP0C7X1 549 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 CD8BP10966 210 aa13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 ENDOUP21128 410 aaKnown RBP13.16□□□□□ -0.3
ATP2C1-201ENST00000328560 GDI1P31150 447 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms